Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4563 114 1e-20 seq4475 109 6e-19 seq4042 102 8e-17 >seq4563 Length=5383265 Score = 114 bits (126), Expect = 1e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| | ||||| || || ||||| || ||||| | |||| | Sbjct 4507150 AGACGCAGCACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGGGTGCGG 4507209 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| || || || |||||| Sbjct 4507210 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCT 4507269 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | || || || | ||| || || ||||| Sbjct 4507270 TTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTG 4507329 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 ||||| || || || | || |||||||| || ||||| |||| || Sbjct 4507330 ATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATGTTGTGTT 4507375 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || ||||| || |||||||||||| | ||| | Sbjct 1837964 AGACGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGT 1838023 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| || || ||||| || Sbjct 1838024 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCC 1838083 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| ||||| || || || | ||||| || | ||||| || | || Sbjct 1838084 TTGTCTTGGATTTTAGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTG 1838143 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | ||||| ||||| |||||||| Sbjct 1838144 ATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1838181 >seq4475 Length=5362458 Score = 109 bits (120), Expect = 6e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| || | ||| | ||| || ||||| ||||| || |||||||||||| Sbjct 1656472 TTCCTCCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG- 1656530 Query 134545 CAACGGTGTGAG--AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || ||||| | || |||||||| || || || || |||| ||||||||| || || Sbjct 1656531 -GACAGTGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGG 1656589 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || || || || || || || || || || || | |||||||| | || Sbjct 1656590 AGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTC 1656649 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || ||||| ||||| || || || | || || ||||| || ||||| Sbjct 1656650 CACTTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1656700 Score = 109 bits (120), Expect = 6e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || |||||||| ||| || ||| | || |||||||| Sbjct 1656725 GTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCTTCGAGCTG 1656784 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || |||| |||||||||||| || || || || || || ||||| || || Sbjct 1656785 CTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTT 1656844 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | ||||| || | ||||| || ||||| ||||| || || || Sbjct 1656845 GGCCTTCACATTCTCAATGGTGTCCGAAGGCTCCACCTCCAGAGTGATGGTCTTTCCAGT 1656904 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || || ||||||||| Sbjct 1656905 CAAGGTCTTCACAAAGATCTGCATTTTG 1656932 >seq4042 Length=640736 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| || || ||||||||| | ||| | ||| || ||||| || || Sbjct 503639 GTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCA 503698 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||||||||||||||| || || || || || || || || || || ||| Sbjct 503699 GCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 503758 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | |||||||| | || || || | || ||||| || || || ||||| Sbjct 503759 ACGTTCTCGATGGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTCAAAGTC 503818 Query 134697 TTAACGAAAATTTGCATTTTG 134717 || |||||||||||||| ||| Sbjct 503819 TTCACGAAAATTTGCATATTG 503839 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| ||||| ||||||||| | ||| | ||| || ||||| || || Sbjct 502955 GTAGACTCCTTCTGAATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCA 503014 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||||||||||||||| || || || || || || ||||| || || ||| Sbjct 503015 GCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTG 503074 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | |||||||| | || || || | ||| ||||| || ||||| | || Sbjct 503075 ACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGGTC 503134 Query 134697 TTAACGAAAATTTGCAT 134713 || || || || ||||| Sbjct 503135 TTCACAAAGATCTGCAT 503151 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || |||||||| || || ||||||||| | ||| | ||| || ||||| || || Sbjct 503411 GTAGATTCCTTCTGGATATTGTAGTCGGACAAGGTACGTCCGTCCTCCAGCTGCTTTCCA 503470 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||||||||||||||| || || || || || || || || || || ||| Sbjct 503471 GCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 503530 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | |||||||| | || || || | ||| ||||| || ||||| | || Sbjct 503531 ACGTTCTCGATGGTGTCGGAAGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGGGTC 503590 Query 134697 TTAACGAAAATTTGCAT 134713 || || || || ||||| Sbjct 503591 TTCACAAAGATCTGCAT 503607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505367153743920