Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq1821 93.3 2e-14 >seq1821 Length=3805 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 2882 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 2941 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 2942 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 3001 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 3002 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 3061 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 3062 TTGACCCTGTC 3072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203283745444180