Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_028888.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq1551 158 3e-34 >seq1551 Length=1910 Score = 158 bits (174), Expect = 3e-34 Identities = 225/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 22003 CGTGATTCAAGCAAAGCAAAATTCTCAACAATGACCTCAGTCACGAATACTTTCTGGCCT 22062 |||| |||||| | | ||| |||||||||| || || || || | ||| ||||| Sbjct 1591 CGTGGTTCAAGGAGGGTAAAGTTCTCAACAACTACTTCGGTAACATAAACTCGTTGGCCC 1650 Query 22063 TGCGCGTTATCATACGTACGTGTTTGGATATGACCTTCGATGCCAACAAGTGAACCCTTG 22122 ||| ||| || || | || || || || |||||||||| ||||||||||||||||| Sbjct 1651 TGCTTGTTCTCGTAATTTCGGGTCTGAATCCGACCTTCGATTCCAACAAGTGAACCCTTA 1710 Query 22123 TGCGTGAAGTTGGCAAAATTCTCGGCAGACTTACGCCAGATGGCACAATTGATGAAGTCA 22182 ||| |||||||||||| || || || || || ||||| || |||| |||| ||||||| Sbjct 1711 TGCACGAAGTTGGCAAAGTTTTCAGCTGATTTTCGCCAAATAACACAGTTGACGAAGTCA 1770 Query 22183 GTTTCTCGTTCCCCATTTGCGCTACGAAATTGGCGATCAACAGCAATCGTAAATGAACCA 22242 | ||| || || ||||| | | || | || |||||||| | ||||| | |||| Sbjct 1771 GCTTCCCGATCACCATTCGAATTGGTGAAACGACGGTCAACAGCTAGGGTAAAAGTACCA 1830 Query 22243 ACCGCTGTTCCGCTTTGCGTATAGCGAAGGCCAACGTCTTTAGTTAATCTGCCTGTTAAA 22302 || || | || |||| || || || | |||||||| ||||| | || || | | Sbjct 1831 ACTGCCGCGCCATTTTGGGTGTATCGCAAATCAACGTCTCGTGTTAAGCGTCCAGTAAGA 1890 Query 22303 GCAACTGAATTAAGCAT 22319 | |||| ||||| ||| Sbjct 1891 ACTACTGTATTAATCAT 1907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126187788082672