Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq1687 84.2 2e-11 >seq1687 Length=1242 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/102 (79%), Gaps = 8/102 (8%) Strand=Plus/Plus Query 27090 CTTAGCTCAGTTGG-TAGAGCGATTGACTTGTAATC-AATAGGTCGTGGGTTCGAATCCT 27147 |||||||||||||| ||||||| || ||| ||||| || ||||||| |||||||||||| Sbjct 210 CTTAGCTCAGTTGGCTAGAGCGCTTCACTAGTAATTGAAGAGGTCGTAGGTTCGAATCCT 269 Query 27148 ACAGTCGGCACCATAACATGGGGTATTAGTTTAGTGGTAAAA 27189 | ||||||| | ||| || | ||||| ||||||| || Sbjct 270 ATAGTCGGC------ATATGCGGAAGTAGTTCAGTGGTAGAA 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519795061683360