Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq3235 288 5e-73 >seq3235 Length=24392 Score = 288 bits (318), Expect = 5e-73 Identities = 529/772 (69%), Gaps = 15/772 (2%) Strand=Plus/Plus Query 66460 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTACCC 66519 |||||| |||||||||| ||| | | ||||| ||| ||||| || || || || Sbjct 4971 GGACGTGGTTCCCACCGGTTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCC 5030 Query 66520 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 66579 | | ||||| ||| | ||||| |||||||| ||| || || || | || ||| || Sbjct 5031 GCGTGGCCGTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCT 5090 Query 66580 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 66639 || || | || | || |||||| || |||| | ||||| || || || ||||| Sbjct 5091 GCATGCCATTGCAGAGGCCCAGAAGCGGGGGGGCACCTGCGCCTTTATTGATGCCGAGCA 5150 Query 66640 CTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 66699 | | |||||||| | ||||||||| ||| || ||||| | || || || || | Sbjct 5151 CGCGCTGGACCCCGGCTACGCCAAGAAGCTGGGCGTGGATATTGATAATCTGCTGATCAG 5210 Query 66700 TCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 66759 |||||||| | || |||||||| ||||| || | ||| || || ||||||| Sbjct 5211 CCAGCCCGACGCGGGTGAGCAGGCGCTGGAAATTGCGGACACACTGGTGCGCTCTGGCGC 5270 Query 66760 GCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGG 66819 | | | | || || ||| ||||||||||| |||||||| |||||||| ||||| Sbjct 5271 GATTGATGTGCTGGTGGTGGACAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGG 5330 Query 66820 CGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAA 66879 || || || ||||| || ||||||||||| || || || ||| ||||| ||||||| Sbjct 5331 GGATATGGGTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCGCTGCGCAA 5390 Query 66880 GCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 66939 ||| || ||| || | | || ||||||| ||| | ||| | |||||| | || Sbjct 5391 GCTGACAGGCTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCT 5450 Query 66940 GAAGATCGGCAACGTG---GGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTT 66996 ||| || ||| || ||| || ||| || ||||| |||||||| || || | Sbjct 5451 GAAAATTGGCGTGATGTTTGGCAAC---CCG---GAAACCACGACGGGCGGGAACGCACT 5504 Query 66997 GAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 67056 || ||||| || || || ||| ||||| |||| ||||||| || ||||| || Sbjct 5505 GAAATTCTATGCTTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGA 5564 Query 67057 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCA 67116 ||||| || ||||||| || ||||||||||| |||||||||||| ||||||||||| Sbjct 5565 TGAGGTGGTGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCGTT 5624 Query 67117 CCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC---GAACT 67173 ||| | | |||||| || |||| || || || ||| | ||||| ||||| Sbjct 5625 CCGTCAGGTCGAGTTTGATATCATGTATGGCGAAGGTATC---AGCAAGGTCGGGGAACT 5681 Query 67174 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTC 67225 | || || | |||| || ||||| |||| || ||||| |||||| Sbjct 5682 GATTGATCTTGGCGTGAAAGCCGGTGTGGTGGAGAAATCCGGCGCATGGTTC 5733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242846160502764