Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4563 149 5e-31 >seq4563 Length=5383265 Score = 149 bits (164), Expect = 5e-31 Identities = 241/340 (71%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 29610 TGGGAAAGGGTC-TGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGG 29668 |||||||||||| ||| | | | || ||||| | | || || || || |||| || Sbjct 3137488 TGGGAAAGGGTCGTGGTGTACGT-TCCAGCTGCTCCTTAAGGGGCTCTACATGGTTCAGA 3137430 Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 |||||||| | || |||| |||||| ||||| || ||||| | || || || || || Sbjct 3137429 TAGACGTGTGTGTCGCCCATGGTGTGCACAAAGTCGCCCGGCTTCAGACCCGTCACATGG 3137370 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 || |||||||| || ||||| | |||| ||||||||| |||||||| || | |||||| Sbjct 3137369 GCGATCATGTAGGTAAGGAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATG 3137310 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC--TCCGTCGCT----CACGTAAAAC 29842 || | ||| ||||||||||||||||| ||||| | || || ||||| ||| Sbjct 3137309 TCGGCGCTCCTTTGGTAGAGCTGGCACGAAAGCTCATTTCGGGTCTGTGAGACGTAGAAC 3137250 Query 29843 TGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGC 29901 || | | |||| |||||||| ||||| ||||| | ||| || ||||| || Sbjct 3137249 TG-CGCCAGGCAGTGGCACGGCGGAAGAGCCATCTTTGGAATGTCCAATGGATTCCACGC 3137191 Query 29902 ACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG 29941 ||| ||||| |||||||| ||||| ||| | ||| Sbjct 3137190 TGACATAATGATACGCCTGTCCGAAGGGTTATTCTTAATG 3137151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406138716736156