Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4471 156 4e-33 >seq4471 Length=3711889 Score = 156 bits (172), Expect = 4e-33 Identities = 527/810 (65%), Gaps = 12/810 (1%) Strand=Plus/Minus Query 4277 CTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATT 4336 ||| |||||||| || || || || || | ||| || | ||||| |||| || || || Sbjct 604318 CTTCTCGAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGGTT 604259 Query 4337 AGTTGCGTTGTA-ATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATT 4395 | | |||||| || ||| |||| || | || ||||| ||||| || ||||| | Sbjct 604258 CTTGGTGTTGTAGATCTTTCCAACACCA-AGCTCCACCAGCAAACGGTCTGCGACAAACT 604200 Query 4396 CTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATG 4455 | || |||||| ||| || ||||| || || || || || | || || || || | || Sbjct 604199 CGATGTACTGGGACATCAGGTCGCAATTCATGCCGATCAAGTTTACGGGAAGGGCATCTG 604140 Query 4456 TCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAG 4515 | | ||||| || || || | || || || ||| || || | || ||| Sbjct 604139 TAAGGAACTCCTGCTCAATGGCCACCGCGTCGCGGATAATCTCGATGATGCGCTCTCGCT 604080 Query 4516 ATGGTTTATTTACTAAGTATCCAAACAATAAACACG-CAAAATCACAATGCAAACCTTCG 4574 |||| | || | || |||| | || ||| |||| || || ||||| |||||| Sbjct 604079 TTGGTCGCTGCACGAGGTGCTGGAACA-TCAAGACGGCAAAGTCGCAGTGCAAGCCTTCG 604021 Query 4575 TCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGC 4634 || | | || |||||||| || || || | || ||||| | || | || || ||| Sbjct 604020 TCCCGGGATATAAGTTCGTTGGAGAATGTCAGGCCCGGCATCAGGCCACGTTTCTTTAGC 603961 Query 4635 CAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACT 4694 || || |||| ||| || || |||||| ||||| |||||||||||||| || | | Sbjct 603960 CAGAAAATAGAGGCGAAGCTGCCGCTAAAGAAGATGCCCTCTACGGCGGCAAAGGCGA-T 603902 Query 4695 AATCGGGACCCGAACGAGCTGGCT---TTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751 ||| | | | || | ||||| ||| | ||||| | ||||||| || Sbjct 603901 AATTCGCTCTCCAA--AATTGGCTGACTTGGATGAGATCCAGGAAAGCGCCCAGTCCGCC 603844 Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTT-TCAAATGG 4810 || ||| || ||| || || | || || || || | | ||| | | || Sbjct 603843 TTGCGCTTTACAGCCGGCATCGTCTCGATGGCATTGAACAGGT-ACTCCCGCTGATGCGG 603785 Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870 ||| | || || ||||| || || | ||||||||||| || || | ||||| || || Sbjct 603784 ATCTCGGATGTATGTGTCGATCAGGACACTATACATTTCGGAGTGCACGTTTTCCATTGC 603725 Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 ||||| || ||||| ||||| | || || || | ||||| || | | ||||| || Sbjct 603724 GATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTGATCTGAACCTCCTGGCTAAATCGCTC 603665 Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 || | ||| ||||| || || || || || ||||| || |||| || || || || Sbjct 603664 AACCAGGTTCTCGTTCACGATTCCATCGGAAGCGGCAAAGAAGGCCAGCACGTGTGAGAT 603605 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 |||| | ||||| ||| || | ||||| | || ||| || | | ||| || Sbjct 603604 GAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAGTCCGTCAGATCCTTGGACAGATCCAC 603545 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| || |||||||| || || || || || Sbjct 603544 TTCCTCCACAGTCCAGAAGGAAGCCTCAGC 603515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427023857717018