Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_030943.1 Length=54990 Score E Sequences producing significant alignments: (Bits) Value seq1821 109 2e-19 >seq1821 Length=3805 Score = 109 bits (120), Expect = 2e-19 Identities = 210/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176 ||||| |||||||| || ||||| | | ||||| ||| ||||| || || |||||| Sbjct 2786 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 2845 Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235 ||| ||| | || || ||| || ||| ||| | || |||||| ||||||| Sbjct 2846 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 2898 Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295 ||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | ||| Sbjct 2899 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 2958 Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355 ||| || | ||||||||| | || ||| ||| ||| ||| ||||| | ||| Sbjct 2959 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 3018 Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415 || ||||| | | ||| || | | || |||||| |||||||||| |||| | || Sbjct 3019 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 3078 Query 53416 CCGGGG 53421 | ||| Sbjct 3079 ACAGGG 3084 Score = 82.4 bits (90), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838 |||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || || Sbjct 3436 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 3495 Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879 | |||||||||||| ||| |||||||||||| ||| || Sbjct 3496 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 3536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175836071881504