Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq1821 109 3e-19 >seq1821 Length=3805 Score = 109 bits (120), Expect = 3e-19 Identities = 210/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 7172 CCCCGGCCGGCTGACCGGGTCAACCGTCAGTTCACCGCGGCGGCACCGAACGCGTTGTGG 7231 ||| | || | |||| |||||||||| |||||| || | | || ||| | | ||| Sbjct 3084 CCCTGTCCCGATGACAGGGTCAACCGGCAGTTCCGGGCCGAGAGCCCCAACCAGCTCTGG 3025 Query 7232 GTGGCGGACCTGACCTACATCCGCACCCACTCGGGCTGGGTGTACGCGGCGTTCGTCCTG 7291 || ||||| | ||||| ||| ||| ||| ||| || | ||||||||| | Sbjct 3024 GTCTCGGACTTTACCTATGTCCAGACCTGGAATGGCATGGTCTATGTAGCGTTCGTCATT 2965 Query 7292 GACGTGTTCTCGCGGATGGTCGTCGGCTGGCAGGTCTCGACCACCATGCACACCGACCTC 7351 || |||||| | || | | |||| |||||| | |||||||| ||||| |||| | || Sbjct 2964 GATGTGTTCGCCCGCAGGATCGTGGGCTGGAAAGTCTCGACTTCCATGACCACCCAGTTC 2905 Query 7352 GCCCTCGACGCCC-TGAACATGGGATTGTGGGCACGGTCGCGTGCCGGCCACGACGTGGC 7410 | |||||||||| |||||| || | ||| ||| || ||| || || | ||| Sbjct 2904 GTGCTCGACGCCCTTGAACA-GGCCATCTGGCAACGAAAGCCTGCGGGAAACAA---GGC 2849 Query 7411 CGGGCTGATCCACCACTCCGACCGCGGAGTGCAATACCGAGCCATCCGCTACACCGAACG 7470 ||||||||| || || ||||| ||| ||||| | | ||||| || |||||||| Sbjct 2848 ---GCTGATCCATCATTCGGACCGTGGATCACAATATCTGTCGATCCGATATACCGAACG 2792 Query 7471 ACTGGC 7476 ||||| Sbjct 2791 CCTGGC 2786 Score = 82.4 bits (90), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 6714 CGCATCGCGGCGTTGGAGCGGGAGAACCGTGAACTGCGGCGAGCGAACACGATCTTGAAG 6773 || ||| |||||||||||| ||| |||||||||||| | || || |||| ||||| Sbjct 3536 CGGATCAAGGCGTTGGAGCGTGAGGTCCGTGAACTGCGTCAGGCCAATGAGATCCTGAAG 3477 Query 6774 CAGGCTTCGGCTTTCTTTGC---GGCGGAGATCGACCGCCC 6811 |||| ||||||| ||||| ||||||| |||||||||| Sbjct 3476 AAGGCCTCGGCTTATTTTGCACAGGCGGAGCTCGACCGCCC 3436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299652336055582