Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4563 565 4e-156 seq4471 214 3e-50 >seq4563 Length=5383265 Score = 565 bits (626), Expect = 4e-156 Identities = 1253/1873 (67%), Gaps = 10/1873 (1%) Strand=Plus/Minus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 ||||| |||| ||||||||||||| | | ||||| ||||| || ||||| ||||| Sbjct 4594974 TTCTTGTCCACGGTGAACTGAATGGCATTCGCAGCTGGCTTTGTCCGCAGATAATACATT 4594915 Query 75425 CCAGTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 || ||||| || ||||| | ||| ||| || || ||| || ||||| ||| | Sbjct 4594914 CCGGTTTTGAG-CCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTCAGTTTTCCATAGTT 4594856 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || |||| ||| ||||| | |||||||| ||||| || || || || | |||||| Sbjct 4594855 TGGCTCTGCTACATGTATATTAAAGGACTGACTCTGATCTATAAACGCACCACGATCAGC 4594796 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 |||||||| || ||| ||| || |||||||||| |||||| ||| | | Sbjct 4594795 GGCCATTTTAATTGTGGACTTCACAGAGATTTCCCAAACGGTTTTGTAAAGGTCACGAAC 4594736 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 | | ||||| | | |||||||||| || || | || || ||| ||||| Sbjct 4594735 CTTCTGTGGAATAGTCTCAATATTTTGAATTGAACCCCTGCTGGAAATGATTTGGTTCTT 4594676 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || ||||| | |||||| | ||| || || | || | | |||| | ||||| | Sbjct 4594675 CATGTCATCGTCCCACAAGTCCAGCTCAGTCAAGTCCCTCAACAAATGATGGTTAACCAC 4594616 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 || ||||| ||||||| ||||||| || ||||||||| | ||||| || || | ||| Sbjct 4594615 CTGGAATTCGCCAGACAGAACTCTTCTGGTATAAATATTAGTAGTATACGGCTCGAAAGA 4594556 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||| ||||| |||| ||| |||||||| || || || |||||||| || |||| | Sbjct 4594555 TTCGTTGTTGCCCATAATCTGAGCAGTAGATGCTGTTGGCATAGGAGCAACCAGCAGGGA 4594496 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 || | || ||| || | | || || ||||| | || ||| ||||| || | | Sbjct 4594495 GTTCCGGACACCGTGCTTCTTTATCGACTCCTTTAGCTTTTGCCAGTCCCAGAGGTTCGT 4594436 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATA 75960 || || ||||| | ||||| || | |||||| ||||| | ||| | ||| Sbjct 4594435 CGGAACTTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTTACCGGGCTTCCCTCATA 4594376 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020 |||||||| | || || | | ||||| ||| ||||| || || || || || || || Sbjct 4594375 AGTTTCGTATGGGCCTTCGATCTGAGCTAATTCACAACTGGCTTCCAAAGCCCCATAGTA 4594316 Query 76021 AATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCAAAAGGATAAT 76079 ||| |||||||| |||| || ||| |||| | ||||||| ||| ||| | || | Sbjct 4594315 AATCGTTTCGAATATCTGCTGATTCAAGAGGCT-CGCTTCATCACTTTCATATGGGAATC 4594257 Query 76080 GTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 76139 | | ||||| |||||||| || | ||||||||||| || || | || | ||| ||| Sbjct 4594256 GCATGAGAATTAATGCATCAGCAAAGCCCTGAACTCCGATGCCCACGGGGCGATGCCTCA 4594197 Query 76140 TATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199 |||||| | || ||||| | || ||| | || ||||| || || || ||||||| Sbjct 4594196 AATTGGACTTCCTTGCCTCTGGCAGCGGATAAAAGTTGATATCGATTATCTTGTTGAGAT 4594137 Query 76200 TTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---TTTCCATCTA 76256 ||||| ||| || || ||||||||||| ||||| || ||| | | Sbjct 4594136 TTCTGGTAACCGTCTTGGTGACTTCCTTTAGTTTTTTGAAATCGTATGTCTTTTCCGGTG 4594077 Query 76257 TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGG 76316 | |||||||| |||||||| || ||||| | |||||||| || | ||||| | || Sbjct 4594076 TGACAAACATGTTAAGAGCAATGGATGCCAAGTTACAAACTGCAATCTCATCCGGGGAGG 4594017 Query 76317 CATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGT 76376 || | | || || ||||| | ||||| || || || || |||| ||| || |||| Sbjct 4594016 AGTACTCGACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCAACATTCTGCTGGT 4593957 Query 76377 TGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTG 76436 | ||||| |||| || | ||||| | || | | ||||| |||||||||| | |||| Sbjct 4593956 TACTCTTCCTGTTGCAGGCATCCTTGAAGAGCATATACGGATTTCCAGTTTCCACTTGTG 4593897 Query 76437 ATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTC 76496 ||| ||||| | ||| | | | ||| || | | | ||| || |||| Sbjct 4593896 CTTCAATAATGGCGAACCATAAGGATTGAGCCTTAACTGTTCGGTTGGCACGGCCCTCTT 4593837 Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 ||||||| ||||||| |||||||||||| ||||| ||||| | | ||||| | Sbjct 4593836 GCTCATATTTCACATATAACTTTTCAAATTCATCGCCCCATACATCGTGAAGGCCAGGGC 4593777 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616 ||| | ||| ||||| | ||||| || |||| ||| || |||||||| || |||| Sbjct 4593776 ATTTGTGCGGGCACATAAGGGACCAATCTCCATTGGCCTCTACACGTTTCATGAAAAGAT 4593717 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 |||||||||| | || ||| |||||||||| | | ||||| || || || || | Sbjct 4593716 CAGGTATCCACAAGGCGTAAAAAAGATCTCGGGCGCGATTCTCTTCCTTGCCAGTGTTTT 4593657 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 | || || || || || || | | |||||| ||||| || || || || || || | Sbjct 4593656 TCTTGAGTTCCAGAAATTCAAAGACATCAGAGTGCCAGGGCTCCAGGTAAATAGCAAAGG 4593597 Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796 | || || || || ||||||||||| | ||| | ||| |||||| | || |||| Sbjct 4593596 CTCCTGGACGCTTGCCGCCTCCCTGATCCACATAACGCGCAACGTTATTGAAGACCCTCA 4593537 Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856 ||| |||| | || || || || ||||||||||| | || || | || ||| | Sbjct 4593536 GCATGGGAACCAGTCCATTGGAAGTTCCATTTGTTCCGCATATCGAAGTACCCTTTGCTC 4593477 Query 76857 GAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT 76916 | ||| | || | ||| || || || || || |||||| || | ||||| | | Sbjct 4593476 GGATACAATGAACATTTAGTCCAATGCCACCAGCAGATTTAGAAATCATGGCACATTGCT 4593417 Query 76917 TCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAG 76976 || | | | | ||||| || || || | ||||| | | ||| ||||| || Sbjct 4593416 CCACAGACTTAAAAATGCCTTCGATGGAGTCGGCTGTCATGGTTAAAAGGAAACATGAAG 4593357 Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036 | | || | || || |||| ||| | || || |||||||||||||| | Sbjct 4593356 ATAGCTGCGGCCGATTTGTGGCTGCTGCAAAAAGCGTTGGTGATGCATGAGTGAAGTACC 4593297 Query 77037 TTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTA 77096 || || | ||||| || ||||| | | || || ||||| || ||||| | Sbjct 4593296 GCTCTGACAAAAGATTATACGTTTCTACGGCCGCGTCGATATCTTCCCCGTGGATTCCGA 4593237 Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156 || || |||||||||||||| || || ||||| | ||||| ||| | || |||| Sbjct 4593236 TCGCAACGCGCATCAACATATGTTGCGGCCGTTCAGCGATCTTACCGTTTCTCTTTAACA 4593177 Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216 | || || ||| | |||||||| || ||||| || || |||||| | ||||| | Sbjct 4593176 AATAAGAACGTTCGAGGGTTTTAAACCCGAAATAATTATACCCAAAGTCGCGATCGTAGA 4593117 Query 77217 TAATAACCGAATT 77229 | ||| ||||| Sbjct 4593116 TTATAGATGAATT 4593104 >seq4471 Length=3711889 Score = 214 bits (236), Expect = 3e-50 Identities = 552/836 (66%), Gaps = 9/836 (1%) Strand=Plus/Minus Query 46330 ACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 46389 |||||||| ||||| || || || |||||||| || || || || || |||| Sbjct 604347 ACTCCCATACGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTTGTCTTTCCGTCCAGC 604288 Query 46390 GATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAAT 46449 || || | ||||| |||| || || || | || || || ||| || || | Sbjct 604287 GAGATCATCTCCATGAAATTGAAAGGGTTCTTGGTGTTGTAGATCTTTCCAACACCAAGC 604228 Query 46450 TCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATT 46509 || | || | ||||| || || || || ||| ||||| || |||||||| Sbjct 604227 TCCACCAGCAAACGGTCTGCGACAAACTCGATGTACTGGGACATCAGGTCGCAATTCATG 604168 Query 46510 CCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCC 46569 || || | || || || || || || ||||| ||||| || ||||| | || || || Sbjct 604167 CCGATCAAGTTTACGGGAAGGGCATCTGTAAGGAACTCCTGCTCAATGGCCACCGCGTCG 604108 Query 46570 --GATATTATCGATGTTACTGTTTC-CTCACTTGGTGGATGCATCAAATGTTTAAACATT 46626 |||| | |||||| | | | || || ||||| | |||| | || | ||||| Sbjct 604107 CGGATAATCTCGATGATGCGCTCTCGCT---TTGGTCGCTGCACGAGGTGCTGGAACATC 604051 Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 || ||||| || || || | |||||| || | || | |||||| || ||||| Sbjct 604050 AAGACGGCAAAGTCGCAGTGCAAGCCTTCGTCCCGGGATATAAGTTCGTTGGAGAATGTC 603991 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 || || ||||| || ||||| || || ||||| || |||| ||||| || |||| Sbjct 603990 AGGCCCGGCATCAGGCCACGTTTCTTTAGCCAGAAAATAGAGGCGAAGCTGCCGCTAAAG 603931 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--AT 46804 || ||||| ||||| || || || |||| || || |||||| || |||| || || Sbjct 603930 AAGATGCCCTCTACGGCGGCAAAGGCGATAATTCGCTCTCCAAAATTGGCTGACTTGGAT 603871 Query 46805 GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863 || ||||| | ||||| || ||||| ||||||| ||||| || || || ||| Sbjct 603870 GAGATCCAGGAAAGCGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATCGTCTCGATGGCA 603811 Query 46864 TTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATAC 46923 || || || | | | || |||| | ||||| || || | | ||||||| Sbjct 603810 TTGAACAGGTACTCCCGCTGATGCGGATCTCGGATGTATGTGTCGATCAGGACACTATAC 603751 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 46983 ||||| || || | |||||| || || ||||| || ||||| || || | ||| ||||| Sbjct 603750 ATTTCGGAGTGCACGTTTTCCATTGCGATCTGGAAACCGTAGAAGCAGCGTGCCTCAGTG 603691 Query 46984 ATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCA 47043 ||||| ||||| | |||||| ||| || ||||| ||||| |||||||| ||| Sbjct 603690 ATCTGAACCTCCTGGCTAAATCGCTCAACCAGGTTCTCGTTCACGATTCCATCGGAAGCG 603631 Query 47044 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAG 47103 ||||| || |||| || ||| || || | || ||| | || || |||| Sbjct 603630 GCAAAGAAGGCCAGCACGTGTGAGATGAAGTGACGCTCGTCGTCCTTTAGGCGATGCCAG 603571 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || | | ||| || || | ||| ||||| || | |||||||| || ||||| || Sbjct 603570 TCCGTCAGATCCTTGGACAGATCCACTTCCTCCACAGTCCAGAAGGAAGCCTCAGC 603515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712890322830720