Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20eugracilis_20[refseq_20GCF_5F000236325.1_202013-03-04] 4,946 sequences; 156,942,009 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4475 150 4e-31 seq4563 141 2e-28 seq4042 136 1e-26 >seq4475 Length=5362458 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || || ||||| || ||| Sbjct 1656697 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAAGTGGAGCCATCCGAC 1656638 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || || ||||| |||||||| || || |||||||| |||||||| Sbjct 1656637 ACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAGCAG 1656578 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||||||||||||| | || || |||| || ||| || Sbjct 1656577 CGTCTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGCACACTGTCCGACTACAACATC 1656518 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1656517 CAGAAGGAGTCCACCCTTCA-CTTG 1656494 Score = 147 bits (162), Expect = 5e-30 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || ||||| || | || ||||| || ||||| || |||||||| Sbjct 1656931 AAAATGC---AGATCTTTGTGAAGACCTTGACTGGAAAGACCATCACTCTGGAGGTGGAG 1656875 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| ||||| || || ||||| || ||||| || || |||||||| Sbjct 1656874 CCTTCGGACACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCA 1656815 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || ||||||||||| || |||||||||||||| | |||||| ||||| Sbjct 1656814 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTTTCCGAT 1656755 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||| |||| || || || || || || |||| || Sbjct 1656754 TACAACATCCAGAAGGAGTCCACTCTTCA-CTTGGTT 1656719 >seq4563 Length=5383265 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||| ||||| || || || |||||| | |||||||| || ||| Sbjct 1838178 CAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCGGAC 1838119 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || || || || ||||| || || || || || || ||||| Sbjct 1838118 ACCATCGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGCATTCCCCCAGATCAGCAG 1838059 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || |||||| | ||||| |||| || ||| || Sbjct 1838058 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACTCTGTCCGACTACAACATC 1837999 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1837998 CAGAAGGAGTCGACCCTTCA-CTTG 1837975 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || ||||| ||| || || Sbjct 4507364 CAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCTTCGGAT 4507305 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||||||||||||||||||||| ||||| || ||||| Sbjct 4507304 ACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAG 4507245 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | || || | || ||||| | Sbjct 4507244 CGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAATATT 4507185 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || |||| |||| Sbjct 4507184 CAGAAAGAGTCCACTTTGCA-CTTG 4507161 >seq4042 Length=640736 Score = 136 bits (150), Expect = 1e-26 Identities = 153/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| ||| | || || || || |||||| | || || || || ||| Sbjct 503832 CAAATTTTCGTGAAGACTTTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCTTCCGAC 503773 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || |||||||| || || ||||| Sbjct 503772 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAG 503713 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| ||||| ||||| || || ||| | || |||| |||| || || | Sbjct 503712 CGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTAC-CTTGTCCGACTACAATAT 503654 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 ||| || || || || ||||| Sbjct 503653 CCAGAAGGAGTCTACTTTGCAT 503632 Score = 134 bits (148), Expect = 3e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || ||||| | ||||| || || ||| Sbjct 503604 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACTTTGGAGGTTGAGCCTTCCGAC 503545 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| || |||||||| || || ||||| Sbjct 503544 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAG 503485 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| ||||| ||||| || || ||| | || |||| |||| || || | Sbjct 503484 CGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTAC-CTTGTCCGACTACAATAT 503426 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| || ||||| || ||||| | ||| Sbjct 503425 CCAGAAGGAATCTACTTTGCATTTGGTT 503398 Score = 118 bits (130), Expect = 3e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || ||||| | ||||| || || ||| Sbjct 503148 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACTTTGGAGGTTGAGCCTTCCGAC 503089 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| || ||||| || |||||||| || || ||||| Sbjct 503088 ACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGATCAGCAG 503029 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| ||||| ||||| || || ||| | || |||| |||| || || | Sbjct 503028 CGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTAC-CTTGTCCGACTACAATAT 502970 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 || || || || || ||||| Sbjct 502969 TCAGAAGGAGTCTACTTTGCAT 502948 Score = 118 bits (130), Expect = 3e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || ||||| | ||||| || || ||| Sbjct 503376 CAGATCTTTGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGCCTTCCGAC 503317 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || ||||| |||||||| || |||||||| || || ||||| Sbjct 503316 ACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAG 503257 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||| ||||| ||||| || || ||| | || |||| |||| || || | Sbjct 503256 CGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTAC-CTTGTCCGACTACAATAT 503198 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 ||| || || || || ||||| Sbjct 503197 CCAGAAGGAGTCTACTTTGCAT 503176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203654918801524