Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5466 264 1e-65 >seq5466 Length=1802269 Score = 264 bits (292), Expect = 1e-65 Identities = 486/708 (69%), Gaps = 26/708 (4%) Strand=Plus/Plus Query 145569 GGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCG 145628 ||| | |||||| | | | ||||||| || | |||||| || ||||||| |||| | Sbjct 949108 GGGATTGTAGCCGACAATCTCAAAGTCATCAAAGCGGAAGTCCTCGATGTCCTGCACCTG 949167 Query 145629 CCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGG 145688 | | ||| ||| |||||||||| || || | | |||||||| |||||| || Sbjct 949168 GCGCTTAATCACTAGCTTGGGAAAGGGACGTGGAGTGCGCGTCAGCTGCTCCTTCAGTGG 949227 Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 ||||||||||| || |||||||||||||| |||||| ||| | |||||| || |||| Sbjct 949228 TTCCACGTGGTTCAGATAGACGTGCGCGTCACCCAGGGTGTGCACGAAGTCGCCCGGCTT 949287 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| ||||| | ||||| | ||||||||| ||||||| |||| || || || ||||| Sbjct 949288 GAGACCCGTTACATGGGCAATCATGTAGGTGAGCAGGGCGTAGGACGCGATATTAAAGGG 949347 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC-- 145866 || ||||| |||||||| | | |||||||||||||||||| || || |||| | Sbjct 949348 TACGCCCAGGCCCATGTCGGCACTCCTCTGGTACAGCTGGCAGGAAAGTTCACCGCGCGT 949407 Query 145867 ----GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 | ||||||||||| |||| ||||| || || || ||||| || | ||| Sbjct 949408 TTGGGAAACGTAGAACTGCGCCAGGCAATGGCACGGAGGAAGAGCCATTTTCGGTATGTC 949467 Query 145923 CGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCC 145982 | ||| ||||| || | | || || | |||| | ||||| |||| || | Sbjct 949468 CAACGGATTCCACGCCGACATGATGATGCGCCTGTCCGACGGGTTGTTCTTAATGGTGTC 949527 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC-TTGGAGTCCACGT 146041 |||| | | | |||||| ||||||| || ||| || ||| | | || ||| Sbjct 949528 GATCACATGGCGCAACTGGTCGACGCCCTTGCCTGTGTAGTC-GTCGTCGCAGGTTCCGT 949586 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCC------CGG 146095 || | ||||| ||||| | ||||||||| || || || || ||||| || | || Sbjct 949587 ACTCCGCCCCAAAGTGGCGCCACTGGAAGCCATACACCGGTCCCAGATCACCCACGGCGC 949646 Query 146096 GCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 ||||| |||| ||||| | | | ||||| || | | | ||| | ||||||| Sbjct 949647 GCTCCGTGTGTCCCAG------CTTGTCTAGGAACTCTCTAGTGCAGTTCTCATCCCAGA 949700 Query 146156 TCTTGACGCCCCTCGC--GGAG-AGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGA 146212 | | ||| | |||| | || ||| |||| |||||| ||| | |||||||| Sbjct 949701 TGTGAACGTTCTTCGCCTGCAGTAGC---TTGGCGTCCGTCTTGCCCGCCACGAACCAGA 949757 Query 146213 GCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260 ||||||| ||| ||||| | ||||||| | |||||| ||||||| Sbjct 949758 GCAGCTCCTCGGCCACCCCGCGAAAGAAGACGCGCTTGGTCGTCAGCA 949805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590034358726160