Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq5446 127 2e-24 seq4595 122 7e-23 >seq5446 Length=1541693 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| ||| ||| | || ||| Sbjct 1371110 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCCTCC 1371169 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| |||||||| || | ||||| || || || || | |||||||| ||| | Sbjct 1371170 AGCTGTTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCCTGA 1371229 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||||| | |||||||||| |||||| |||||| Sbjct 1371230 ATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGTTCCACCTCCAAGGTAATGGTCTTG 1371289 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || || || || || |||||||||||| || Sbjct 1371290 CCGGTAAGGGTTTTAACGAAGATTTGCATGGTG 1371322 >seq4595 Length=987418 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||| ||| || |||| |||| ||| Sbjct 267375 ACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAATCGGACAAAGTGCGACCGTCCTCC 267434 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| ||||| ||||| || || ||||| | |||||||||||| Sbjct 267435 AGTTGCTTGCCGGCGAAAATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 267494 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | ||||| ||| ||||||| || || || || Sbjct 267495 ATTTTGGCCTTCACGTTCTCAATAGTGTCCGACGGCTCTACCTCCAGAGTGATGGTTTTT 267554 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || |||||||| ||||| |||||| Sbjct 267555 CCGGTAAGGGTCTTCACGAAGATCTGCATG 267584 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||| |||||||||||| || ||| | || Sbjct 268056 AAGACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCT 268115 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || |||| ||||| || || ||||| | |||||||||||| Sbjct 268116 TCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCC 268175 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||| ||| || | | | | ||||| ||||||||||| || || ||| Sbjct 268176 TGGATTTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTC 268235 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || ||||| |||||||| ||||| |||||| Sbjct 268236 TTTCCGGTCAGGGTCTTCACGAAGATCTGCATG 268268 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| |||||||||||| || ||| |||| Sbjct 268512 AAGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGACCGTCC 268571 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| |||| ||||| || || ||||| | |||||||||||| Sbjct 268572 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCC 268631 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| || || | | | | || ||| ||||||| |||||| || Sbjct 268632 TGAATTTTGGCTTTCACATTCTCGATCGTATCGGAGGGCTCAACCTCCAGGGTAATGGTT 268691 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || |||| |||||||||||||| ||||| ||| Sbjct 268692 TTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTTG 268727 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| |||||||| ||| || ||| | || Sbjct 267600 AAGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGACAAAGTGCGTCCATCT 267659 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| |||| ||||| || || ||||| | |||||||| || Sbjct 267660 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTATCT 267719 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | | ||||| ||||||||||| || || ||| Sbjct 267720 TGAATCTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTC 267779 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||| |||||||| ||||| ||||| Sbjct 267780 TTTCCGGTCAGGGTCTTCACGAAGATCTGCAT 267811 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||| |||||||||||| || ||| |||| Sbjct 268284 AAGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAAAGTACGACCGTCC 268343 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| |||| ||||| || || ||||| | |||||||| || Sbjct 268344 TCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTATCT 268403 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | | ||||| ||||||||||| || || ||| Sbjct 268404 TGAATCTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTC 268463 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || |||||||| ||||| ||||| Sbjct 268464 TTTCCGGTGAGGGTCTTCACGAAGATCTGCAT 268495 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| |||| || ||||||||| || ||||| || ||| ||| | || || Sbjct 267831 ACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAATCAGACAGAGTGCGCCCATCTTCA 267890 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || || ||||| | |||||||||||| Sbjct 267891 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGG 267950 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | ||||| ||||||||||| || || ||||| Sbjct 267951 ATTTTGGCCTTTACATTCTCGATAGTGTCCGATGGCTCCACCTCCAGAGTGATGGTCTTT 268010 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| |||||||| ||||| |||||| Sbjct 268011 CCAGTCAGGGTCTTCACGAAGATCTGCATG 268040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395047494610834