Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5466 230 2e-55 >seq5466 Length=1802269 Score = 230 bits (254), Expect = 2e-55 Identities = 332/466 (71%), Gaps = 8/466 (2%) Strand=Plus/Plus Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948 ||||| ||||| || || | | |||||| | ||| || || |||||||| || Sbjct 949187 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCTCCTTCAGTGGTTCCACGTGGTTCAGATAG 949246 Query 20949 ACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCG 21008 ||||| |||||||||| ||||||||| ||||| ||||| | || ||||| || || || Sbjct 949247 ACGTGCGCGTCACCCAGGGTGTGCACGAAGTCGCCCGGCTTGAGACCCGTTACATGGGCA 949306 Query 21009 ATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCG 21068 |||| || || || ||||||||| ||||| ||||| || || || |||||||||||| Sbjct 949307 ATCATGTAGGTGAGCAGGGCGTAGGACGCGATATTAAAGGGTACGCCCAGGCCCATGTCG 949366 Query 21069 GCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCC------GAGCCACGTAAAACTGA 21122 || ||||||||||||||||||||| || || || | | | ||||| ||||| Sbjct 949367 GCACTCCTCTGGTACAGCTGGCAGGAAAGTTCACCGCGCGTTTGGGAAACGTAGAACTGC 949426 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182 || || || ||||| |||||||| || | |||| || |||||||| || Sbjct 949427 GCCAGGCAATGGCACGGAGGAAGAGCCATTTTCGGTATGTCCAACGGATTCCACGCCGAC 949486 Query 21183 ATAACGATGCGCC-GATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTG 21241 || | |||||||| | || ||| | | ||||| || | ||| | |||| ||| Sbjct 949487 ATGATGATGCGCCTGTCCGACGGGTTG-TTCTTAATGGTGTCGATCACATGGCGCAACTG 949545 Query 21242 GTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCT 21301 ||| || |||| || ||||| | ||||| | ||||||||||||||| || | Sbjct 949546 GTCGACGCCCTTGCCTGTGTAGTCGTCGTCGCAGGTTCCGTACTCCGCCCCAAAGTGGCG 949605 Query 21302 CCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCC 21347 ||||||||| || |||||||| |||||||| ||| || ||| ||| Sbjct 949606 CCACTGGAAGCCATACACCGGTCCCAGATCACCCACGGCGCGCTCC 949651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427746001405920