Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq2355 102 9e-17 >seq2355 Length=1409 Score = 102 bits (112), Expect = 9e-17 Identities = 153/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 6509 GCGATAACATGAAGAAGCGGGCCGCCTTGAATACCCGGGAAGATAGCAGAATTTACTTTC 6568 || ||||| || | ||||| ||||| || | ||| ||||||| || || || | || Sbjct 213 GCAATAACGTGCATCAGCGGACCGCCCTGCAAACCGGGGAAGACGGCGGAGTTGATCTTT 272 Query 6569 TTGGCGATATCAGCATCGTTAGTAAGAATGAGGCCACCACGAGGGCCGCGCAAAGTTTTA 6628 ||||| | | ||||||| || || || || ||||| || ||||| |||| |||||| Sbjct 273 TTGGCCAGCGCTTCATCGTTGGTCAGGATCAGCCCACCGCGCGGGCCACGCAGCGTTTTA 332 Query 6629 TGAGTTGTAGTAGTAACAACGTCGGCACCCCATTTGAGTGGATTAGCGTGAAGACGAGCA 6688 || || || | || || || | || | | || ||||| | || || | |||| Sbjct 333 TGCGTGGTGGACGTCACCACATGCGCGTGC---TCAAGCGGATTGGGGTAGAGGCCAGCA 389 Query 6689 GCAACAAAGCCAGCAAAATGGGCCATATCGACCATCA 6725 || || | |||||||||||||||||||| ||||||| Sbjct 390 GCCACCAGACCAGCAAAATGGGCCATATCAACCATCA 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555323255501840