Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5466 145 5e-30 >seq5466 Length=1802269 Score = 145 bits (160), Expect = 5e-30 Identities = 310/457 (68%), Gaps = 11/457 (2%) Strand=Plus/Plus Query 25387 TGGGAAAGGGTC-TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGG 25445 |||||||||| | ||| | | || ||||| |||||| ||||| ||||| | ||| Sbjct 949185 TGGGAAAGGGACGTGGAGTGCGCGTC-AGCTGCTCCTTCAGTGGTTCCACGTGGTTCAGA 949243 Query 25446 TAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505 |||||||| ||||| ||||| ||||| || || || ||||| | || || || || | Sbjct 949244 TAGACGTGCGCGTCACCCAGGGTGTGCACGAAGTCGCCCGGCTTGAGACCCGTTACATGG 949303 Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||| ||||| ||||||||||| || | |||||| Sbjct 949304 GCAATCATGTAGGTGAGCAGGGCGTAGGACGCGATATTAAAGGGTACGCCCAGGCCCATG 949363 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCG------TCGCTCACGTAAAA 25619 || | | ||||||||| ||||| || || || || || | | ||||| || Sbjct 949364 TCGGCAC-TCCTCTGGTACAGCTGGCAGGAAAGTTCACCGCGCGTTTGGGAAACGTAGAA 949422 Query 25620 CTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGC 25679 ||| || | | ||||||||||||||| || | ||| || ||||| || Sbjct 949423 CTGCGCCAGGCAATGGCACGGAGGAAGAGCCATTTTCGGTATGTCCAACGGATTCCACGC 949482 Query 25680 GCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAG 25739 ||| |||||||| |||||| ||||||| | | || || | ||| Sbjct 949483 CGACATGATGATGCGCCTGTCCGACGGGTTGTTCTTAATGGTGTCGATCACATGGCGCAA 949542 Query 25740 CTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 25798 ||| || || ||| | || | |||||| | | || || | |||||| || || || | Sbjct 949543 CTGGTCGACGCCCTTGCCTGTGTAGTCGTCGTCGCAGGTTC-CGTACTCCGCCCCAAAGT 949601 Query 25799 ACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCC 25835 | ||||||||| || ||||||||||| || || || Sbjct 949602 GGCGCCACTGGAAGCCATACACCGGTCCCAGATCACC 949638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340113747213042