Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5380 91.5 1e-13 >seq5380 Length=870010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| ||||| | || || || || | || || || | || ||| | || ||||| Sbjct 656577 ACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAAC 656636 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 | || || ||||| | |||||| |||||| ||||||||||| || ||||| | Sbjct 656637 CGTCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAG 656696 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| ||| | ||||| | || |||||||| || ||||||| | | | || |||| Sbjct 656697 ATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGATT 656756 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||||||| || || || || | || || ||| Sbjct 656757 ATAACATTCAGAAGGAGTCCACTTTGCACTTGGTG 656791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429905849931870