Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq5649 89.7 6e-13 >seq5649 Length=2333656 Score = 89.7 bits (98), Expect = 6e-13 Identities = 217/328 (66%), Gaps = 3/328 (1%) Strand=Plus/Minus Query 127542 TGCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGG 127601 ||||||| || || || ||||||||||| |||| | |||||||||| |||| | ||| Sbjct 452859 TGCACGGATTCCATGTTCACGAGTTCGGAGACAACACCAACGGTTGCATGTCGTCCGGGC 452800 Query 127602 AACACTTCAATCCCACCGGTATGGATCACGGAGCGCCCAACGCGCTCGTTCGTCACGTTG 127661 ||||| ||||| | | | ||| ||||| || |||| || ||| || | | Sbjct 452799 CGCACTTTAATCCGTACAGCAAGGAGCACGGTGCACCCACCGACGAGAATCGCCATCTGG 452740 Query 127662 GCGACCTGGGCAACGTGGAGGCGGCTAGCAGCAATTCTTTGACCGAAGTCAACATCATCG 127721 |||||||||||||| | || ||| | | || | | | || | || ||||||| || Sbjct 452739 GCGACCTGGGCAACATCGA---GGCCACCGGCGACTGTCCCACGAAGGTGAACATCACCG 452683 Query 127722 ACCACGTCATGTCTCTGTACGGACCGAACAGCGTCATCGGTAGGAGTCTGGTCGTGCACA 127781 || || | || | ||| | ||||| ||||||| | | |||| || ||| Sbjct 452682 ACTCGAAGATCACGCTCTTCGGCGCCGACAGCATCATCGGACGCACCGTGGTGGTCCACG 452623 Query 127782 CGGATCGTGACGATCTCGGCCTGACCGATCATTATTTGAGCAAAACCACCGGCAACTCGG 127841 | ||| || ||||||||| | | || | ||||||| |||| |||||| | | Sbjct 452622 CCGATGCCGATGATCTCGGCAAGGGTGGACACGAGCTGAGCAAGTCCACGGGCAACGCTG 452563 Query 127842 GCGGTCGGTTGGGGTGCGGGATCATTGG 127869 | | || | || ||||| ||||||| Sbjct 452562 GTGCCCGCATCGGCTGCGGCGTCATTGG 452535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537564532889840