Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_009804.1 Length=83319 Score E Sequences producing significant alignments: (Bits) Value seq1678 102 4e-17 seq1747 89.7 3e-13 >seq1678 Length=14721 Score = 102 bits (112), Expect = 4e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 14223 ATAAAACTCGTCCTCCACCACGGAGTAGCGGGCCGAAATCTCGTTCACGCTCGCCGTGCG 14282 ||| ||||| |||| | ||| |||||||| ||| ||||||||||| ||| | || Sbjct 14310 ATAGAACTCACTGTCCAGAATGGAATAGCGGGCAGAATATTCGTTCACGCTGGCCATACG 14369 Query 14283 GTGGCGGAACCATTGGCGGGCCACAAAGATGGGAGCCTTGACGTGGAACTTGAACTCCAC 14342 |||||| | ||| || ||||| | |||||||| |||||||| ||||||| ||| Sbjct 14370 GTGGCGAATCCACTGCCGGGCAATGAAGATGGGCAGTTTGACGTGAAACTTGATCTCACA 14429 Query 14343 CATCTCAAAGGGCGACCAATGCTCGTGCTTGAGCAGGTAGCGGATGAGTTTTTCGTCATC 14402 ||||||||| || || |||| |||| | |||||| ||||| || | || || Sbjct 14430 CATCTCAAACGGTGAGGAATGGCGGTGCCGCATCAGGTAACGGATCAGCCCGGCATCTTC 14489 Query 14403 CCTAACGGTCTTGGTGCCCTTGCCATAGGAGACCCTAGCCGCCCGAACAAT 14453 ||| | ||||||| ||| ||||| || | || ||| | ||||| Sbjct 14490 AGAAACCTTGCGGGTGCCCCGGCCGTAGGAAACGCGTGCTGCCTGCACAAT 14540 >seq1747 Length=3787 Score = 89.7 bits (98), Expect = 3e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 14244 GGAGTAGCGGGCCGAAATCTCGTTCACGCTCGCCGTGCGGTGGCGGAACCATTGGCGGGC 14303 ||| || ||||| ||| ||||||||||| ||| | |||||||||| ||| || || || Sbjct 2717 GGAATAACGGGCAGAATATTCGTTCACGCTGGCCATACGGTGGCGGATCCACTGCCGCGC 2658 Query 14304 CACAAAGATGGGAGCCTTGACGTGGAACTTGAACTCCACCATCTCAAAGGGCGACCAATG 14363 |||||||| || |||||||| || || | ||| ||| ||||| ||||| |||| Sbjct 2657 TACAAAGATCGGCAGTTTGACGTGAAATTTCATCTCGCACATTTCAAACGGCGAGGAATG 2598 Query 14364 CTCGTGCTTGAGCAGGTAGCGGATGAG 14390 ||| | |||||||||||| || Sbjct 2597 ACGATGCCGCATCAGGTAGCGGATCAG 2571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 266477311468320