Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5351 93.3 9e-14 >seq5351 Length=991022 Score = 93.3 bits (102), Expect = 9e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||||| |||||||| | || || ||| ||||| ||||| ||||| |||||||| | Sbjct 257445 CTTATCGGCATGAATTGCGATCTGATGTCGCAGTATATCGAGTTCGTGGCCGACCGTTTG 257386 Query 243622 TTCATCGCGCTTGGTTATGAGAAAG-TGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | | | | || || ||||| | |||||| |||||||||||||| ||| ||||| Sbjct 257385 CTGGTGGAGTTGGGCGTTG-GAAAGATCTACAACACCAAGAACCCCTTTAACTTCATGGA 257327 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720 | | |||||||| | || || || ||||| ||||| ||| Sbjct 257326 GATGATTTCGCTGGACGGCAAGACAAACTTTTTCGAGAAG 257287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102798692239900