Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq2548 251 3e-62 >seq2548 Length=1187 Score = 251 bits (278), Expect = 3e-62 Identities = 447/650 (69%), Gaps = 9/650 (1%) Strand=Plus/Minus Query 65914 TTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCC 65973 ||||||||||||| | | ||||| |||||| || || || || ||| | |||| Sbjct 645 TTCCCACCGGCTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCCGCGTGGCC 586 Query 65974 GGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGG 66033 | || | || || ||||| || || || || || | ||| || || || || Sbjct 585 GTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCTGCATGCCA 526 Query 66034 TGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCG 66093 | || | ||||||||| || |||| | ||||| ||||| ||||| || | || | Sbjct 525 TTGCAGAGGCCCAGAAGCGGGGCGGCACCTGCGCCTTTATCGATGCCGAGCACGCGCTGG 466 Query 66094 ACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAG 66153 |||| | |||||| | |||||| |||||| | || ||||| || | ||||| | Sbjct 465 ACCCCGGCTACGCCAAGAAGCTCGGCGTGGATATTGATAATCTGCTGATCAGCCAGCCCG 406 Query 66154 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCA 66213 || | || |||||||| |||| || | ||| || || ||||||| | || Sbjct 405 ACGCGGGTGAGCAGGCGTTGGAAATTGCGGACACACTGGTGCGCTCTGGCGCGATTGATG 346 Query 66214 TCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCG 66273 | | || ||||| |||||||||||| |||||||| || ||||| |||||||| || | Sbjct 345 TGCTGGTGGTGGATAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGGGGATATGG 286 Query 66274 GGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCG 66333 | ||| || |||||||||||||| || |||||| |||||| ||||||||||||| | Sbjct 285 GTGACAGCCATGTCGGCCTGCATGCGCGGCTGATGAGTCAGGCGCTGCGCAAGCTGACAG 226 Query 66334 GCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCG 66393 | | |||| || ||||||| | | | | |||| ||| | || ||| || | Sbjct 225 GTTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCTGAAAATTG 166 Query 66394 GC---AACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCT 66450 || | | ||| | |||| || ||||| || || || || || ||| |||| Sbjct 165 GCGTGATGTTTGGCAA---CCCG---GAAACCACGACGGGCGGGAACGCACTGAAGTTCT 112 Query 66451 ACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTG 66510 ||||||| |||||| ||||| ||||| | |||| || ||||| ||||||| | Sbjct 111 ACGCCTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGATGAGGTGG 52 Query 66511 TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCG 66560 | ||||||| ||||| |||||||| |||||||||||| |||| || ||| Sbjct 51 TGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242453396308568