Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4595 100 2e-16 seq5380 86.0 4e-12 >seq4595 Length=987418 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || || ||||| || || || || |||||||| ||| | | | | |||| Sbjct 268512 AAGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGACCGTCC 268571 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | || ||||| ||| | |||| |||||| || || |||||||| |||||||| Sbjct 268572 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCC 268631 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||||| ||| ||| | || || |||||| || || || | |||||||||| Sbjct 268632 TGAATTTTGGCTTTCACATTCTCGATCGTATCGGAGGGCTCAACCTCCAGGGTAATGGTT 268691 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 || || |||| || || ||||| || ||||| || || Sbjct 268692 TTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGA 268729 >seq5380 Length=870010 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 || || || || || ||||| ||||| ||| | | | ||||| | || |||||| Sbjct 656778 GTGGACTCCTTCTGAATGTTATAATCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCA 656719 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 ||| | |||| |||||| || || ||||||||||| ||||| ||| ||| ||| Sbjct 656718 GCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 656659 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| |||| |||||||| ||| || || | ||| ||||| || || || || || Sbjct 656658 ACATTTTCGATAGTATCCGACGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 656599 Query 15160 TTTACAAAAATTTGCATATT 15179 || || || || ||||| || Sbjct 656598 TTAACGAAGATCTGCATCTT 656579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357366937215890