Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq2690 89.7 6e-13 seq2850 84.2 3e-11 >seq2690 Length=8871 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCAC-CTCGCTAGTTTTCAAGACTA 31348 ||||| ||||||||||||||||||||| | | || | | | ||| ||||||||||||| Sbjct 6691 GCGGAAGGGGTGGGATTCGAACCCACGGTACGGTTACCCGCACGCCAGTTTTCAAGACTG 6750 Query 31349 GAGCCTTCAACCACTCGACCACC 31371 ||||||||||||||||| ||||| Sbjct 6751 GAGCCTTCAACCACTCGGCCACC 6773 >seq2850 Length=1160 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCAC-CTCGCTAGTTTTCAAGACTA 31348 ||||| ||||||||||||||||||||| | | || | | | ||| ||||||||||||| Sbjct 571 GCGGAAGGGGTGGGATTCGAACCCACGGTACGGTTACCCGCACGCCAGTTTTCAAGACTG 512 Query 31349 GAGCCTTCAACCACTCGACCACC 31371 |||||||||||| |||| ||||| Sbjct 511 GAGCCTTCAACCGCTCGGCCACC 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622080053673760