Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq5583 84.2 3e-11 seq2027 84.2 3e-11 >seq5583 Length=19632 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 193010 TTTGGTGGAGACAATGGGACTCGAACCCACGACCCCCAGCTTGCAAGGCTAGTGCTCTCC 193069 |||||||||| || || ||||||| ||||||||| |||||||| || ||||||||| Sbjct 12733 TTTGGTGGAGGCAGACGGGTTCGAACCGACGACCCCCTGCTTGCAAAGCAGGTGCTCTCC 12674 Query 193070 CAACTGAGCTATATCCCCAAA 193090 || ||||||||| ||||||| Sbjct 12673 CAGCTGAGCTATGCCCCCAAA 12653 >seq2027 Length=7295 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 ||||| |||| || ||||||||||| |||||| | ||||||||||| ||||||||||| Sbjct 713 TGGTGAGCCGGGAGGGACTCGAACCCTCGACCATTCGATTAAAAGTCGAATGCTCTACCA 772 Query 191922 ACTAAGCTAACGGC 191935 ||| ||||| |||| Sbjct 773 ACTGAGCTACCGGC 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720677761523520