Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4595 127 8e-24 seq1974 104 9e-17 seq5380 102 3e-16 seq5446 89.7 2e-12 >seq4595 Length=987418 Score = 127 bits (140), Expect = 8e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || ||||| || || || || ||||| || || || |||| Sbjct 267812 AATGCAGATCTTCGTGAAGACCCTGACCGGAAAGACCATCACTCTGGAGGTGGAGCCATC 267753 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | | || || |||||||||||||| ||||||||||| ||||| Sbjct 267752 GGACACCATCGAGAATGTGAAGGCCAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCA 267693 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || || |||||||||||| | |||||| | ||||| || Sbjct 267692 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACTTTGTCCGATTACAA 267633 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| |||| || ||||| || || Sbjct 267632 CATCCAGAAGGAGTCAACCCTCCACTTGGTCTT 267600 Score = 109 bits (120), Expect = 2e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || ||||||| ||||| ||||| || || ||||| | || Sbjct 268724 AATGCAGATCTTTGTGAAGACCTTGACTGGAAAAACCATTACCCTGGAGGTTGAGCCCTC 268665 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || || | | ||| |||||||| || ||||| ||||||||||| ||||| Sbjct 268664 CGATACGATCGAGAATGTGAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGATCA 268605 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||| | || ||| | || || || ||||| || || | |||||| | || || || Sbjct 268604 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACTTTGTCCGACTACAA 268545 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| |||| || ||||| || || Sbjct 268544 CATCCAGAAGGAGTCAACCCTCCACTTGGTCTT 268512 Score = 107 bits (118), Expect = 8e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || ||||| || || || |||| Sbjct 268495 ATGCAGATCTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTGGAGCCATCG 268436 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || |||||||||||||| ||||||||||| ||||| Sbjct 268435 GACACCATCGAGAATGTGAAGGCCAAGATTCAAGATAAGGAGGGAATTCCTCCAGATCAG 268376 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | |||||| | || || || ||||| || || | |||||| | || || || Sbjct 268375 CAGCGTCTGATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACTTTGTCCGACTACAAC 268316 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| |||| || ||||| || || Sbjct 268315 ATCCAGAAGGAATCAACCCTCCACTTGGTCTT 268284 Score = 104 bits (114), Expect = 9e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || ||||| || || || |||| Sbjct 268267 ATGCAGATCTTCGTGAAGACCCTGACCGGAAAGACCATCACTCTGGAGGTGGAGCCATCG 268208 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || ||||| || || ||||| ||||||||||| ||||| Sbjct 268207 GACACCATCGAGAATGTGAAGGCCAAAATCCAGGACAAGGAGGGAATTCCTCCAGATCAG 268148 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || |||||||||||| | |||||| | || || || Sbjct 268147 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGCACTTTGTCCGACTACAAC 268088 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || || ||||| || || Sbjct 268087 ATCCAGAAGGAATCGACCCTCCACTTGGTCTT 268056 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || || || ||||| || || || |||| Sbjct 268039 ATGCAGATCTTCGTGAAGACCCTGACTGGAAAGACCATCACTCTGGAGGTGGAGCCATCG 267980 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||| || || ||||| ||||||||||| ||||| Sbjct 267979 GACACTATCGAGAATGTAAAGGCCAAAATCCAGGACAAGGAGGGAATTCCTCCAGATCAG 267920 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || ||||||||||| | ||| || | ||||| ||| Sbjct 267919 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAAGATGGGCGCACTCTGTCTGATTACAAT 267860 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 267859 ATCCAGAAGGA 267849 >seq1974 Length=2389 Score = 104 bits (114), Expect = 9e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || | ||||| |||||||||||||| || || || ||||| | Sbjct 341 ATTTCCGCTTTCGTTCTGGGCAAAATGAAAGAAACCGCCGAGGCGTACCTTGGTGAAAAA 400 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || | || || || || ||||| ||||| || || ||||| || || || || || Sbjct 401 GTGACGCAGGCCGTGATCACGGTTCCGGCTTACTTTAACGATGCCCAGCGTCAGGCTACC 460 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||||||||| | |||||||||| | | || || || || || || ||||| || || Sbjct 461 AAAGATGCAGGCCGTATTGCTGGTCTTGAAGTCCTGCGTATCATCAACGAACCGACGGCT 520 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAA 451459 |||||||| || ||||| | |||||| Sbjct 521 GCTGCTCTTGCTTATGG-CATGGAAAA 546 >seq5380 Length=870010 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || || || || ||||| || ||| | || Sbjct 656582 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAACCGTCG 656641 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | ||| || ||||| || || |||||||||||||| ||||| Sbjct 656642 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 656701 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || |||||||| | || | | |||||||| Sbjct 656702 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCTGATTATAAC 656761 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || | ||||| || Sbjct 656762 ATTCAGAAGGAGTCCACTTTGCACTTGGT 656790 >seq5446 Length=1541693 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || || || || ||||| | || || ||| | || Sbjct 1371318 ATGCAAATCTTCGTTAAAACCCTTACCGGCAAGACCATTACCTTGGAGGTGGAACCTTCG 1371259 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| |||||||| ||||| || || ||||| Sbjct 1371258 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 1371199 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || ||||| || || |||||| | || || | || || || Sbjct 1371198 CAGCGTCTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACCCTGTCCGACTACAAC 1371139 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 1371138 ATCCAGAAGGAGTCGACCCTCCACTTGGT 1371110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975572743865432