Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5351 118 1e-21 seq2263 111 2e-19 >seq5351 Length=991022 Score = 118 bits (130), Expect = 1e-21 Identities = 298/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 ||||| || |||| ||||| || || || ||||||||| || |||| | | Sbjct 257712 GAGCGCATCATCGCCTTTGCCGCCGTGGAAGGCATCTTCTTCAGCGGCAGCTTCGCCTCC 257653 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 |||| ||||| ||||||||||| || ||||| || || ||||||||||||||| ||| Sbjct 257652 ATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCGGGACTGACCTTCTCCAACGAGCTGATC 257593 Query 102300 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG-GAACTTTTCAAATTATTGCGTAT 102358 || | |||||||| || || || || || ||| | || || ||| | | Sbjct 257592 TCAAGGGACGAGGGTCTGCATTGCGATTTCGCAGTGCTGATGTTCCAGCACCTTGTGCAG 257533 Query 102359 TAAACCAA-CGACTGAGACTATTCATT-CTATTGTTAAGGAAGCCGTTGAGATTGAGAAG 102416 | |||| ||| ||| | ||||| || || || || || | |||||| || Sbjct 257532 CGACCCAAGCGA--GAG-CGCATCATTGAAATCATTCGCGATGCGGTGGCCATTGAGCAG 257476 Query 102417 GGATTCATATTGGATGCCCTTCCA-TGCGCTCTCATCGGTATGAATTCTGAAAAGATGTC 102475 | ||| | |||||||| ||| || | || ||||| ||||||| || |||||| Sbjct 257475 GAGTTCCTCACCGATGCCCTGCCAGTGAAC-CTTATCGGCATGAATTGCGATCTGATGTC 257417 Query 102476 CGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAATTTG 102535 | ||||| |||| || | || | ||| || | || | || || || | Sbjct 257416 GCAGTATATCGAGTTCGTGGCCGACCGTTTGCTGGTGGAGTTGGGCGTTGGAAAGATCTA 257357 Query 102536 GAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTT 102595 ||| ||||||| || ||| |||||||||||| ||| || ||||| ||||||||||| Sbjct 257356 CAACACCAAGAACCCCTTTAACTTCATGGAGATGATTTCGCTGGACGGCAAGACAAACTT 257297 Query 102596 CTTCGAAAAGAGGGTTGGGGACTA 102619 ||||| |||| |||||| || || Sbjct 257296 TTTCGAGAAGAAGGTTGGCGAATA 257273 >seq2263 Length=7733 Score = 111 bits (122), Expect = 2e-19 Identities = 198/282 (70%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031 ||||| || |||||||| || | |||||| | || || || || ||||||||| | Sbjct 7388 TCAAACCCGTCCATCTCGACCAGCATCTGGTTCAGCGTCTGCTCACGCTCATCATTCCC- 7330 Query 16032 GGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 16089 || | | || |||| || || |||||||| ||||| || |||||||||| || Sbjct 7329 -GCCGCCAAGGCCCGCACCACGATGGCGGCCCACGGCGTCAATTTCGTCAATGAAGATGA 7271 Query 16090 TGCATGGTT-GATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 |||| || | ||| | | || | || | || || |||||| || || ||| Sbjct 7270 TGCACGGCGCGGCCTTCTTGCCCTGCT-CGAACATGTCACGCACACGCGACGCACCAACA 7212 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207 || |||||||| |||||||||| | ||||| || | || ||| || ||||| | || Sbjct 7211 CCGACAAACATTTCCACAAAGTCAGACCCGGAA-ATGGTGAAGAACGGCACATTGGCCTC 7153 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 |||||||||||| || || || || ||||||||||| || || Sbjct 7152 ACCCGCAATGGCACGCGCCAGCAGGGTCTTACCCGTGCCCGG 7111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620697753102880