Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2263 129 7e-25 seq1678 82.4 9e-11 >seq2263 Length=7733 Score = 129 bits (142), Expect = 7e-25 Identities = 340/510 (67%), Gaps = 18/510 (4%) Strand=Plus/Minus Query 11490 CACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGAC 11549 |||| || || ||| || ||||| || || || || ||||| || || | || Sbjct 7488 CACCACAACCTGACGGTCAAAACGGCCGGGACGCAGCAGAGCCGGGTCCAGCACGTCCGG 7429 Query 11550 ACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTC 11606 |||||| || || ||||| | | | ||| ||||||| || || |||||||| || Sbjct 7428 ACGGTTGGTGGCAGCAATCAGGATCACGCC---CTCATTGCTTTCAAACCCGTCCATCTC 7372 Query 11607 TGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGA 11666 || | |||||| | |||||| ||||||||||| || | | || || Sbjct 7371 GACCAGCATCTGGTTCAGCGTCTGCTCACGCTCATCATTCCCGCCGCCAAGGCCCGCACC 7312 Query 11667 ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA-C 11725 ||| | || || |||||||| || || ||||| | ||| ||||| | | | | Sbjct 7311 ACGATGGCGGCCCACGGCGTCAATTTCGTCAATGAAGATGATGCACGGCGCG--GCCTTC 7254 Query 11726 GTGCC-TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784 |||| || ||||| | ||||| |||||| ||| |||||||| || ||||| || || Sbjct 7253 TTGCCCTGCTCGAACATGTCACGCACACGCGACGCACCAACACCGACAAACATTTCCACA 7194 Query 11785 AAGTTTGCGGCAGAACAC-TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGC 11843 |||| | | ||| |||| ||| || ||||| | |||||| || ||||| || || Sbjct 7193 AAGTCAGACCCGGAAATGGTGAA-GAACGGCACATTGGCCTCACCCGCAATGGCACGCGC 7135 Query 11844 GAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGC 11903 || || ||||||||||| || || | || | || ||| |||| |||||| ||| | Sbjct 7134 CAGCAGGGTCTTACCCGTGCCCGGAGGCCCGACCAGCAGGACGCCCTTGGGGATTTTGCC 7075 Query 11904 ACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTC 11960 || || ||| | || || | || |||||||| ||||| |||| ||| || Sbjct 7074 GCCCAGACGGGTAAATT---TCTGCGGGTCTTTCAGGAAGTCGACAATTTCCTGAAGCTC 7018 Query 11961 CTCCTTGGCGGAGTCGATACCCTCAACATC 11990 ||||||| || |||||| ||||||| Sbjct 7017 ACCCTTGGCTTCATCAATACCCGCAACATC 6988 >seq1678 Length=14721 Score = 82.4 bits (90), Expect = 9e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 40271 GGGCTCATCCGATATCTCCTTAGGCACTGGCATACGACCCCTTTTGAAATGGTCGATTTC 40330 ||||| ||||| || || | ||||| | ||| | | || ||||| ||| || || Sbjct 14480 GGGCTGATCCGTTACCTGATGCGGCACCGCCATTCCTCACCGTTTGAGATGTGTGAGATC 14421 Query 40331 AAGTTTCACATCAAAATGCCCATCTACATCGCACGACAGCACCTTCGGCACCGCACCGCC 40390 ||||||||| ||||| ||||||||| ||| || || ||| |||| ||||| | ||| Sbjct 14420 AAGTTTCACGTCAAACTGCCCATCTTCATTGCCCGGCAGTGGATTCGCCACCGTATGGCC 14361 Query 40391 AGTGTGAATGAGTTGTCTGCTCGTTACTCC 40420 || ||||| || | ||||| || || ||| Sbjct 14360 AGCGTGAACGAATATTCTGCCCGCTATTCC 14331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588933637901200