Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq2547 84.2 3e-11 >seq2547 Length=3490 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 141337 TTAGCTCAGAGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCGATCCCGTCA 141395 |||||||||||||||||| |||||||||||||||| || ||||||||||| ||||||| Sbjct 2280 TTAGCTCAGAGGTAGAGCGTCTCGTTTACACCGAGAGGGCCGGCGGTTCGACCCCGTCA 2338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610352897210160