Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2145 91.5 2e-13 seq5342 82.4 9e-11 >seq2145 Length=43147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 223/338 (66%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAA 154826 ||||| || ||||| ||||| | || |||||||||| | ||| || || || | || Sbjct 10725 ATGGCGGGCATGAAGGTTGTGGTGGTGAAGTGTGATGCCGGTGGCAATATTGATCTGGAA 10784 Query 154827 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAC 154886 || | | |||||| | | | | ||| ||||| | ||||| || || Sbjct 10785 GACATGCGGGAGAAAGTGACCGCTCACGCGGCTGATCTGTCCGCAGTGATGATCACCTAT 10844 Query 154887 CCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGAC 154946 || || || ||||| || |||||| | ||| | | || ||| | | || ||| | Sbjct 10845 CCCTCCACCCATGGCGTGTTTGAAGAAAGCATGCGTGAAATCTGTGATCTGGTGCATCAG 10904 Query 154947 AATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAA 155006 || || ||||| ||| | ||||| || || | || || ||||| || || || Sbjct 10905 GCCGGAGGGCAGGTGTATGTGGATGGCGCGAACATGAACGCGCAGGTGGGCCTTGCCCGC 10964 Query 155007 CCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 || |||| || |||| ||||| | ||| | ||| | || ||||| ||||||||||| Sbjct 10965 CCCGGTGATTACGGTGGCGATGTCAGCCATTTCAACCTGCACAAAACGTTCTGTATTCCG 11024 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| || || ||||| ||| | || || || || || Sbjct 11025 CATGGTGGCGGTGGTCCGGGCATGGGGCCAATTGGCGT 11062 >seq5342 Length=2476920 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 154950 GGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCA 155009 || |||||||| || || ||||||||||| | ||||| || || || | |||| Sbjct 2168558 GGAGGTCAGGTTTACCTGGATGGAGCAAACATGAATGCCCAAGTCGGTTTGTGCCGACCA 2168617 Query 155010 TGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACAT 155069 | || ||||| ||||| | ||||| || | || || || ||||| ||||| ||| Sbjct 2168618 GGAGATTATGGCAGTGATGTTTCGCATCTCAATCTGCACAAGACCTTCTGCATTCCTCAT 2168677 Query 155070 GGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| || |||||||| | ||||| || ||||| Sbjct 2168678 GGAGGAGGTGGTCCTGGAATGGGTCCCATTGGTGT 2168712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579171140119360