Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2145 120 4e-22 seq1675 96.9 4e-15 >seq2145 Length=43147 Score = 120 bits (132), Expect = 4e-22 Identities = 260/389 (67%), Gaps = 0/389 (0%) Strand=Plus/Plus Query 159391 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450 || ||| |||| || | || || || || || || || || || || |||||| || Sbjct 10674 GTGTGTCTGATTCCGGCCTCCGCCCACGGCACCAACCCGGCCTCCGCCCAGATGGCGGGC 10733 Query 159451 ATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAG 159510 ||||| ||||| | || |||||||||| | |||||| || || | |||| | | Sbjct 10734 ATGAAGGTTGTGGTGGTGAAGTGTGATGCCGGTGGCAATATTGATCTGGAAGACATGCGG 10793 Query 159511 AAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACA 159570 |||||| | | | | ||| ||||| | ||||| || ||||| || || Sbjct 10794 GAGAAAGTGACCGCTCACGCGGCTGATCTGTCCGCAGTGATGATCACCTATCCCTCCACC 10853 Query 159571 CATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGT 159630 ||||| || |||||| || ||| | | || ||| | | || ||| || || || Sbjct 10854 CATGGCGTGTTTGAAGAAAGCATGCGTGAAATCTGTGATCTGGTGCATCAGGCCGGAGGG 10913 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 ||||| ||| | ||||| || || | || || ||||| || || || || |||| Sbjct 10914 CAGGTGTATGTGGATGGCGCGAACATGAACGCGCAGGTGGGCCTTGCCCGCCCCGGTGAT 10973 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 || |||| ||||| | ||| | ||| | || || || ||||||||||| ||||| || Sbjct 10974 TACGGTGGCGATGTCAGCCATTTCAACCTGCACAAAACGTTCTGTATTCCGCATGGTGGC 11033 Query 159751 GGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || ||||| ||| | || || ||||| || Sbjct 11034 GGTGGTCCGGGCATGGGGCCAATTGGCGT 11062 >seq1675 Length=4024 Score = 96.9 bits (106), Expect = 4e-15 Identities = 322/499 (65%), Gaps = 4/499 (1%) Strand=Plus/Plus Query 159283 GGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTG 159342 |||| |||| | |||| || || || ||| | || | |||||||| ||||| || ||| Sbjct 3 GGGTATGATGCCGTATCGTTTCAGCCGAACTCCGGGGCGCAGGGTGAATATGCCGGTCTG 62 Query 159343 TTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATA 159402 | || ||| || || || | | | || |||| | | | ||| || |||| Sbjct 63 CTGGCCATCAGCGCCTATCACCGCGCACAGGGTGATGCACACCGTACTGTCTGCCTGATC 122 Query 159403 CCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTA 159462 || | || || || || || || || || || || |||||| || ||| | || || Sbjct 123 CCGGCTTCCGCGCACGGTACCAACCCGGCTTCTGCCCAGATGGCGGGCATGCAGGTGGTT 182 Query 159463 GGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAG--CAA 159520 | |||| ||| |||| | ||||| || ||| | | ||| | | |||| || Sbjct 183 GTGGTCAGGTGCGATGCGGGCGGCAATATCGACCTTGATGATATGCGGGCCAAAGTGCAG 242 Query 159521 TCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTAT 159580 | | || | ||| ||| | | ||||| || || || || || || || || | Sbjct 243 GC--GCATGCCCGTGATCTGGCTGCGGTGATGATCACTTACCCCTCCACCCACGGCGTGT 300 Query 159581 TTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATC 159640 ||||| || ||| | | || ||| | | || |||||| ||||||||||| || Sbjct 301 TTGAAGAAAGCATGCGTGAAATCTGTGATCTGGTGCATGAGGCCGGTGGTCAGGTGTACG 360 Query 159641 TTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAG 159700 | ||||| || || | || |||||||| ||||| || || || || || | | Sbjct 361 TGGATGGCGCGAACATGAACGCACAGGTCGGTCTGGCGCGCCCGGCGGATTACGGCGGGG 420 Query 159701 ATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTG 159760 |||| | || | ||| | || || || ||||| ||||| ||||| || || ||||| | Sbjct 421 ATGTCAGCCACTTCAACCTGCACAAAACCTTCTGCATTCCGCATGGCGGCGGTGGTCCCG 480 Query 159761 GCGTAGGTCCTATTGGTGT 159779 || | || || ||||| || Sbjct 481 GCATGGGGCCGATTGGCGT 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588008904417440