Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq4570 80.6 8e-11 seq1687 80.6 8e-11 >seq4570 Length=2302 Score = 80.6 bits (88), Expect = 8e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGG-TAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 46707 ||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 1671 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGCGGGTTCGAGACCCTC 1730 Query 46708 CGGGCCTGC 46716 | ||||| Sbjct 1731 CACCCCTGC 1739 >seq1687 Length=9402 Score = 80.6 bits (88), Expect = 8e-11 Identities = 60/69 (87%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGG-TAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 46707 ||||||||||||| |||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 742 GTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 801 Query 46708 CGGGCCTGC 46716 | ||||| Sbjct 802 CACCCCTGC 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153698297269832