Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq5400 118 1e-21 >seq5400 Length=1891037 Score = 118 bits (130), Expect = 1e-21 Identities = 160/220 (73%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 197073 CTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCC 197132 || ||| || | || || ||||| |||||||| | || ||||| || || | | || Sbjct 1525109 CTCGTTTTCTGTATCATAGCAGGCAAGTAAGAACCCTCCATAGGTACCAGTGCGCCGGCC 1525050 Query 197133 CACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCAT--G 197190 | || ||| |||| ||||| ||||| |||||||| | ||||| ||| || || | Sbjct 1525049 CTTTCCCTTGTAGCCGCCGATCACCACGAGATCCAGTGAGTCGCCCACA--TTAGATAAG 1524992 Query 197191 TAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTT 197250 |||||||| || ||||| | |||| |||| ||||||||||| || || ||||| || | Sbjct 1524991 TAATCTTTTTTTAGTTTTAACCAGTTTCTCGATCTCTTGGCGATTTCATAGGTAGCCTCC 1524932 Query 197251 ACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCT 197290 | | ||||||||| | ||| | ||||| |||| ||||| Sbjct 1524931 TCATTCAGGGTCTTTACCATGAGGCCCTCACAAT-TTCCT 1524893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676680926223520