Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5351 190 4e-43 >seq5351 Length=991022 Score = 190 bits (210), Expect = 4e-43 Identities = 361/523 (69%), Gaps = 14/523 (3%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-GCTCTATCCA 25570 |||||||| || ||| | || ||| |||||||| || || |||| || ||| | | Sbjct 258076 CTGGACCGTGGAGGAGGTGGACCTGTCCAAGGACCTGACCGACTGGCACCGCTTGAAGGA 258017 Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630 ||||||| || ||| | | |||||||||| ||||| |||||||| ||||| || | Sbjct 258016 C-GACGAGCGCCACTTTATTTCGCACGTGTTGGCCTTCTTCGCAGCCTCCGATGGCATTG 257958 Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690 | || ||||||||| ||| | |||| | ||| |||||| | |||||| || | Sbjct 257957 TCAATGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGATCACAGAGGCCCGCTGCT 257898 Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGA 25750 ||||||| |||||||| ||||| || || |||||||| ||| |||| || | |||| Sbjct 257897 TCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTA---CAGTGTGCTGA 257841 Query 25751 T-GACGTACATTACAGACGT----CGC-CGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| |||| ||| || ||| | || |||| ||||| |||||||| Sbjct 257840 TCGAC--ACAT-ACATCCGCGATCCGCACCAGCGAGAGTACCTGTTCAACGCCATCGAAA 257784 Query 25805 ACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG 25864 || || | ||| | ||||| ||||||||| |||||| | | || | Sbjct 257783 CGATGCCGGCGGTGAAGCGCAAGGCTGACTGGGCCATGTCCTGGATCTCCTCCAAGTCAG 257724 Query 25865 CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTT 25924 | | || || ||||| | | |||||||| || ||||| |||||||| |||||||| Sbjct 257723 CCAACTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAAGGCATCTTCTTCAGCGGCA 257664 Query 25925 CGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCA 25984 || || |||| |||||||| ||| || || ||||| || ||| ||| |||| Sbjct 257663 GCTTCGCCTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCGGGACTGACCTTCTCCA 257604 Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGC 26027 ||||||| ||| |||||||||||||| || | ||||| || Sbjct 257603 ACGAGCTGATCTCAAGGGACGAGGGTCTGCATTGCGATTTCGC 257561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928777992837760