Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5380 183 4e-41 >seq5380 Length=870010 Score = 183 bits (202), Expect = 4e-41 Identities = 1135/1785 (64%), Gaps = 62/1785 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| | ||||| ||||| || ||||| || |||||||| || || || ||| ||| Sbjct 559349 CCCACAACATATGTTGATGCGCGTGGCAATTGGAATCCACGGAGAGGATATCGATGCTGC 559290 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| || ||| | ||||| | | | || | ||| || | ||||| || || Sbjct 559289 TGTGGAAACCTACAATCTTTTGTCCGAGCGATTCTTTACTCATGCCTCGCCAACTCTTTT 559230 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||| ||| | || ||| |||| || ||||| | ||| | || || Sbjct 559229 TGCCGCTGCCACAAATCGCCCACAGTTGTCTTCGTGTTTCCTCTTGACCATGACGGCCGA 559170 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGT-GTGCGCAA--ATCTCAAAGTGGGC 75447 ||| ||| | || || | | || | | |||| |||||| | || ||||| | ||| Sbjct 559169 CTCGATCGAGGGCATTT-TCAAATCCGT--GGAGCAGTGCGCCATGATTTCAAAATCGGC 559113 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGA 75506 || |||||||| || | | ||| | | || || | |||| ||| | || | Sbjct 559112 AGGTGGTATTGGACTGAATGTGCATTGCATTCGGGCAAAGGGCACCTCG-ATTTGCGGCA 559054 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | ||||| || ||||| | |||| ||||| | || |||||| | || || | Sbjct 559053 CCAATGGCACCTCCAATGGTCTGGTTCCCATGCTGAGGGTCTTTAACAACGTTGCACGGT 558994 Query 75567 ATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCAT 75620 |||| |||| | | |||| ||||| || || | || | ||| |||| |||| Sbjct 558993 ATGTGGATCAGG-GAGGCG--GCAAGCGTCCTGGCGCCTTTGCTATTTACCTGGAGCCAT 558937 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAA-GGTGACGAAGAGGCT 75679 ||||| | ||| || | |||||||| ||| | | | || || || | |||||| | Sbjct 558936 GGCATTCGGATGTCTTCGAGTTCCTCGAGCT-CAAGAAAAACACCGGAAAGGAAGAGAAT 558878 Query 75680 CGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || || | | || | || | || ||||||| || || || |||||||| || || || Sbjct 558877 CG-TGCACGCGACTTATTCTACGCCTTGTGGATACCCGATCTCTTCATGAAACGTGTAGA 558819 Query 75739 GG--AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 || | | || | ||||| || | ||||| | || || || || ||| | Sbjct 558818 GGCCAACGAGG--ATTGGTCCCTCATGTGTCCTCATAAATGCCCCGGCCTTCACGATGTT 558761 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 ||| || || |||||| || ||| ||||| || | |||||| | ||||| || Sbjct 558760 TGGGGCGACGAATTTGAAAAGCTGTACTTGAAGTACGAGCAAGAGGGTCGTGCCAAC-CG 558702 Query 75857 ACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 | | || | | | || ||| || ||| | | | ||| ||| || |||| Sbjct 558701 AGTAGTTAAGGCTCAGTCCTTGTGGTTCGCGATTATTGAGGCGCAGGTGGAAACGGGAAA 558642 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || |||||||| | || ||||| || ||| |||||| ||||| ||||| | || || Sbjct 558641 TCCTTATATGCTCTTTAAAGATGCCTGCAACCGGAAGAGCAACCAGCAGAATGTTGGCAC 558582 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 |||||| || || |||||||| ||||| |||||||| | | ||||||| || Sbjct 558581 TATCAAGTGCAGCAACCTTTGCACAGAAATCGTAGAGTACTCTGCGCCAGATGAGATTGC 558522 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095 || ||||| |||||||| ||||||||| | || |||| |||| || | Sbjct 558521 AGTATGCAACTTGGCATCCATCGCCCTTAACATGTTCGTCACACCCGAGAAG---ACGTA 558465 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 |||| | ||||| | ||| | || |||| || ||||||||||| ||| | || Sbjct 558464 CGATTTCAAGAAACTAAAAGAAGTTACCAAGACGGTCACCAAAAATCTTAACAAGATAAT 558405 Query 76156 TGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG---TCTAATATGCGACACAGACC 76212 || | ||| | ||||||| | | | | | |||| || ||| || |||| | || Sbjct 558404 CGATATAAACTATTATCCCCT---GCCGGAGGCAAAGAAATCCAATTTGAGACATCGCCC 558348 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA 76272 | || | || ||||| ||| |||| || | || ||| | || | | | | ||| Sbjct 558347 CGTGGGCATCGGAGTTCAGGGTTTCGCTGACGCCTTGATTCTCATGCGATTCCCCTATGA 558288 Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332 || ||||| ||||| | || |||||||| || || ||| | | Sbjct 558287 AAGTGAAGAAGCTGGTCTTTTGAATCAGCAGATATTTGAAACTATTTACTACGGCGCTTT 558228 Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392 |||||| |||||||| ||||||| | ||| | || || || | ||| || || Sbjct 558227 GGAGGCCAGTTGTGAGCTGGCTGAGATTGATGGTCCATACGAAACCTATGAAGGGAGCCC 558168 Query 76393 CG--CGTCCCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAA--CCAA-GCTCAA 76446 || || ||||| | || |||| || |||||||| ||| |||| | | Sbjct 558167 CGTAAGT---AAGGGTATTCTGCAGTACGACATGTGGGA---CAAAACGCCAACGAACCT 558114 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | |||||| | || ||||| |||||| || | ||| | | ||| || | Sbjct 558113 GTGGGACTGGCAGAAACTGAAGGAGTCGATCAAGAAGCACGGTGTCAGGAACTCCCTGCT 558054 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 |||| || ||||| || || || || || || || |||| || || |||| || || Sbjct 558053 TGTGGCTCCTATGCCCACTGCATCTACTGCCCAGATTATGGGCAACAACGAATCTTTCGA 557994 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || || || || || || ||| ||| || || | || || ||| | ||||| Sbjct 557993 GCCGTATACGACTAATATTTACACTAGACGAGTTCTGTCCGGCGAATTTCAAGTGGTCAA 557934 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTC-TCTGGTCCAAGGATATGAAGGATC 76685 | | ||| | | | ||||| | | ||||| | | ||| | | ||||||||| | | Sbjct 557933 CCATCACTTGTTGAGGGACCTGACTGA-ATTGGACTTGTGGGACGATGATATGAAGAACC 557875 Query 76686 TCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCC--CAGATGATATCA 76742 || | ||| || || ||||||||||| ||| || |||| |||| | | | Sbjct 557874 AAATAATTTCCAGCAGG-GGCTCCATTCAAAACATCGAAGCCATCCCGCAGAAGGT-CCG 557817 Query 76743 AGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAG 76802 || |||| ||| || |||||||||||| |||| | ||| | |||||||| | Sbjct 557816 AG-ATCTTTACAAAACCGTGTGGGAAATCTCTGTGAAGTCTACTATTAAAATGGCCGCTG 557758 Query 76803 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAAGTCCAA 76859 |||| ||| ||||| |||||||| || | || |||||| | | || | || Sbjct 557757 ATCGAGGTGCTTTCATCGATCAAAGCCAGTCCTTCAA--CATTCATGTGGCAGAGCCAAA 557700 Query 76860 CGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAA 76919 | | | ||||| | || || || | ||| | |||||| ||||| |||||||||| Sbjct 557699 CTACG-GAAAGCTTACGTCCATACACTTTTACTCCTGGAAAGCTGGGCTTAAAACCGGAA 557641 Query 76920 TGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||||||||| || ||||| || ||| | |||||||||| Sbjct 557640 TGTACTATCTGCGCACAAAGCCGGCAGCAAACGCCATTCAGTTCA 557596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526691731520