Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value seq2548 302 2e-77 >seq2548 Length=1187 Score = 302 bits (334), Expect = 2e-77 Identities = 463/658 (70%), Gaps = 9/658 (1%) Strand=Plus/Minus Query 66144 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCC 66203 |||||| |||||||||||||| | | ||||| ||||||||| || || || || Sbjct 653 GGACGTGGTTCCCACCGGCTCTCTGGGGCTGGATATCGCTCTGGGGATTGGCGGCCTGCC 594 Query 66204 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 66263 | | ||||| ||| | ||||| |||||||| ||| || || || | || ||| || Sbjct 593 GCGTGGCCGTGTGATTGAAATTTACGGCCCGGAAAGCTCCGGTAAAACCACGCTGGCGCT 534 Query 66264 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 66323 || || | || | || |||||| || |||| | ||||| ||||| || ||||| Sbjct 533 GCATGCCATTGCAGAGGCCCAGAAGCGGGGCGGCACCTGCGCCTTTATCGATGCCGAGCA 474 Query 66324 CTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 66383 | | |||||||| | ||||||||| |||||| ||||| | || || || || | Sbjct 473 CGCGCTGGACCCCGGCTACGCCAAGAAGCTCGGCGTGGATATTGATAATCTGCTGATCAG 414 Query 66384 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 66443 ||||| ||| | || |||||||| |||| || | ||| || || ||||||| Sbjct 413 CCAGCCCGACGCGGGTGAGCAGGCGTTGGAAATTGCGGACACACTGGTGCGCTCTGGCGC 354 Query 66444 GCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGG 66503 | | | | || || || |||||||||||| |||||||| |||||||| ||||| Sbjct 353 GATTGATGTGCTGGTGGTGGATAGTGTGGCGGCCCTTGTGCCGCGTGCCGAGCTTGAAGG 294 Query 66504 CGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAA 66563 || || || ||||| || ||||||||||| ||||| || ||| ||||| ||||||| Sbjct 293 GGATATGGGTGACAGCCATGTCGGCCTGCATGCGCGGCTGATGAGTCAGGCGCTGCGCAA 234 Query 66564 GCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 66623 ||| || || || | | || ||||||| ||| | ||| | |||||| | || Sbjct 233 GCTGACAGGTTCCGTTGCGCGCTCCAACACCATGATGATCTTCCTGAACCAGATCCGTCT 174 Query 66624 GAAGATCGGC---AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTT 66680 ||| || ||| | | ||| | |||| || ||||| |||||||| || || | Sbjct 173 GAAAATTGGCGTGATGTTTGGCAA---CCCG---GAAACCACGACGGGCGGGAACGCACT 120 Query 66681 GAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 66740 || |||||||||||| || || ||||| |||| ||||||| || ||||| || Sbjct 119 GAAGTTCTACGCCTCCGTGCGTCTGGATATCCGCCGCATCGGGTCCATCAAGGACAAGGA 60 Query 66741 TGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 66798 ||||| || ||||||| || ||||||||||| |||||||||||| ||||||||||| Sbjct 59 TGAGGTGGTGGGCAACCAGACGCGGGTGAAGGTGGTCAAGAACAAGATGGCCCCGCCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244603645507736