Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq1575 95.1 4e-15 >seq1575 Length=1066 Score = 95.1 bits (104), Expect = 4e-15 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 50107 CTGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACC 50166 |||||||||| ||| ||||||||||| ||||||| |||| |||||||||| ||||||||| Sbjct 159 CTGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGAGCCTGACGAGCTACC 100 Query 50167 GAACTGCTCTACTCCGCATT 50186 | |||||| || |||| || Sbjct 99 GGGCTGCTCCACCCCGCGTT 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181590791280348