Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5466 279 6e-70 >seq5466 Length=1802269 Score = 279 bits (308), Expect = 6e-70 Identities = 476/688 (69%), Gaps = 22/688 (3%) Strand=Plus/Plus Query 146841 GAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTT 146900 ||| || || ||||||| |||| | | | |||| |||||||| ||||| || || | Sbjct 949144 GAAGTCCTCGATGTCCTGCACCTGGCGCTTAATCACTAGCTTGGGAAAGGGACGTGGAGT 949203 Query 146901 CCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 146960 | | |||||| ||||| || ||||||||||| || |||||||||||||| ||||| Sbjct 949204 GCGCGTCAGCTGCTCCTTCAGTGGTTCCACGTGGTTCAGATAGACGTGCGCGTCACCCAG 949263 Query 146961 GGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAG 147020 ||||||||| ||||| |||||||| || || || || ||||| | ||||||||||||||| Sbjct 949264 GGTGTGCACGAAGTCGCCCGGCTTGAGACCCGTTACATGGGCAATCATGTAGGTGAGCAG 949323 Query 147021 CGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAG 147080 | |||| || || || ||||| || |||||||||||||| | |||||||||||| Sbjct 949324 GGCGTAGGACGCGATATTAAAGGGTACGCCCAGGCCCATGTCGGCACTCCTCTGGTACAG 949383 Query 147081 CTGGCACGAGAGCTCCCCG------TCGGCCACGTAAAACTGGCACAGGATGTGGCACGG 147134 |||||| || || || ||| | || ||||| ||||| |||| |||||||| Sbjct 949384 CTGGCAGGAAAGTTCACCGCGCGTTTGGGAAACGTAGAACTGCGCCAGGCAATGGCACGG 949443 Query 147135 CGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCT 147194 || || ||||| || | |||| || ||||| ||||| | | | |||||| Sbjct 949444 AGGAAGAGCCATTTTCGGTATGTCCAACGGATTCCACGCCGACATGATGATGCGCCTGTC 949503 Query 147195 CTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCC 147254 | ||||| ||||||| ||||| || | || |||||| ||||||| ||| Sbjct 949504 CGACGGGTTGTTCTTAATGGTGTCGATCACATGGCGCAACTGGTCGACGCCCTTGCCTGT 949563 Query 147255 GTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACA 147313 |||| | ||| ||||| ||||| ||||||||||| | |||||||||||| |||| Sbjct 949564 GTAG-TCGTCGTCGCAGGTTCCGTACTCCGCCCCAAAGTGGCGCCACTGGAAGCCATACA 949622 Query 147314 CTGGCCCCAGGTCGCC----GGGCTTTCTGTGCGAGAAGCCCGCCCGCTTG---AGAAAC 147366 | || ||||| || || | || || ||| | || ||||| || ||| Sbjct 949623 CCGGTCCCAGATCACCCACGGCGCGCTCCGTGTG-------TCCCAGCTTGTCTAGGAAC 949675 Query 147367 TCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCC 147426 || | | || | ||||||||| || ||| || || ||| | |||| Sbjct 949676 TCTCTAGTGCAGTTCTCATCCCAGATGTGAACGTTCTTCGCCTGCAGTAGCTTGGCGTCC 949735 Query 147427 GTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTG 147486 || |||| | |||||||||||||||||| ||||| | | ||||| | |||| Sbjct 949736 GTCTTGCCCGCCACGAACCAGAGCAGCTCCTCGGCCACCCCGCGAAAGAAGACGCGCTTG 949795 Query 147487 GTGGTCAGCAGGGGGAACTGGTCCCTCA 147514 || ||||||| || || ||||||| Sbjct 949796 GTCGTCAGCAAAGGAAAAGAATCCCTCA 949823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583446032625600