Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5380 444 8e-120 >seq5380 Length=870010 Score = 444 bits (492), Expect = 8e-120 Identities = 1232/1875 (66%), Gaps = 12/1875 (1%) Strand=Plus/Plus Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 ||| |||| || |||||||||| | ||| || ||||| || ||||||||||| || Sbjct 557585 CTTGTCCACGGTGAACTGAATGGCGTTTGCTGCCGGCTTTGTGCGCAGATAGTACATTCC 557644 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 |||||| || || |||| ||| || || || || || || || |||| Sbjct 557645 GGTTTTAAGCCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTAAGCTTTCCGTAGTTTGG 557704 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 || || | |||||| || | || || ||||||||||||||||| |||| ||| || || Sbjct 557705 CTCTGCCACATGAATGTTGAAGGACTGGCTTTGATCGATGAAAGCACCTCGATCAGCGGC 557764 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 |||||| ||| || ||| || |||||||| | || || ||| | | || | Sbjct 557765 CATTTTAATAGTAGACTTCACAGAGATTTCCCACACGGTTTTGTAAAGATCTCGGACCTT 557824 Query 68604 AT-CTGGAAGGCT-CG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660 | | ||| |||| || | ||||||||||| || | ||| || ||| ||||| || Sbjct 557825 CTGCGGGATGGCTTCGATGTTTTGAATGGAGCCCCTGCTGGAAATTATTTGGTTCTTCAT 557884 Query 68661 CTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720 ||||| | |||||| | || || | | || | | || | || || | ||| Sbjct 557885 ATCATCGTCCCACAAGTCCAATTCAGTCAGGTCCCTCAACAAGTGATGGTTGACCACTTG 557944 Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780 |||||| || || | |||| | ||||||||||||| | ||||| || || | |||||| Sbjct 557945 AAATTCGCCGGACAGAACTCGTCTAGTGTAAATATTAGTCGTATACGGCTCGAAAGATTC 558004 Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 || || |||| ||| || ||||| |||||||| |||||||| ||||| | | || Sbjct 558005 GTTGTTGCCCATAATCTGGGCAGTAGATGCAGTGGGCATAGGAGCCACAAGCAGGGAGTT 558064 Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900 || | ||| || | |||| || || || | | ||| ||||| || | | ||| Sbjct 558065 CCTGACACCGTGCTTCTTGATCGACTCCTTCAGTTTCTGCCAGTCCCACAGGTTCGTTGG 558124 Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATT-ATATG 68959 | ||| | ||||| || ||||| || |||||| | | ||| || ||| | Sbjct 558125 CGTTTTGTCCCACATGTCGTACTGCAGAATACCCTTACTTACGGG-GCTCCCTTCATAGG 558183 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 |||| || || || || ||||| || |||||||| ||||| || || ||||| |||| Sbjct 558184 TTTCGTATGGACCATCAATCTCAGCCAGCTCACAACTGGCCTCCAAAGCGCCGTAGTAAA 558243 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | ||||| || |||| || ||| | | |||||| ||| || | || | | | Sbjct 558244 TAGTTTCAAATATCTGCTGATTCAAAAGACCAGCTTCTTCACTTTCATAGGGGAATCGCA 558303 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 ||||| || || || || || |||||||| || || || | || | ||||||| || Sbjct 558304 TGAGAATCAAGGCGTCAGCGAAACCCTGAACTCCGATGCCCACGGGGCGATGTCTCAAAT 558363 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 | || | | || || || | |||||||| || ||||| || || || ||||||||| Sbjct 558364 TGGATTTCTTTGCCTCCGGCAGGGGATAATAGTTTATATCGATTATCTTGTTAAGATTTT 558423 Query 69200 GGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA--TCGTC-CATCTATAA 69256 | || || || || |||||||| ||||| | || || | | | | Sbjct 558424 TGGTGACCGTCTTGGTAACTTCTTTTAGTTTCTTGAAATCGTACGTCTTCTCGGGTGTGA 558483 Query 69257 CAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCAT 69316 | ||||| || || || | ||||| | || || ||||| | ||||| | | | Sbjct 558484 CGAACATGTTAAGGGCGATGGATGCCAAGTTGCATACTGCAATCTCATCTGGCGCAGAGT 558543 Query 69317 ATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTAC 69376 | | || || ||||| || || || || || |||||||| || | ||| ||||| || | Sbjct 558544 ACTCTACGATTTCTGTGCAAAGGTTGCTGCACTTGATAGTGCCAACATTCTGCTGGTTGC 558603 Query 69377 TCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATT 69436 |||| ||| ||||| || || | || ||| | ||| | || ||||| | ||| | | Sbjct 558604 TCTTCCGGTTGCAGGCATCTTTAAAGAGCATATAAGGATTTCCCGTTTCCACCTGCGCCT 558663 Query 69437 CGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTT 69496 | ||||| | ||| | | | ||| || | ||| ||| ||| ||||| | Sbjct 558664 CAATAATCGCGAACCACAAGGACTGAGCCTTAACTACTCGGTTGGCACGACCCTCTTGCT 558723 Query 69497 CATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATT 69556 | || | || ||| ||| ||||| || ||||||||||| | | || || |||| Sbjct 558724 CGTACTTCAAGTACAGCTTTTCAAATTCGTCGCCCCAAACATCGTGAAGGCCGGGGCATT 558783 Query 69557 CATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGG 69616 || |||||||| | ||||| | || | ||| || |||||||| || ||||||| Sbjct 558784 TATGAGGACACATGAGGGACCAATCCTCGTTGGCCTCTACACGTTTCATGAAGAGATCGG 558843 Query 69617 GAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675 | ||||| | || || || || || | | | ||| ||||| ||||| || ||||| Sbjct 558844 GTATCCACAAGGCGTAGAATAAG-TCGCGTGCACGATTCTCTTCCTTTCCGGTGTTTTTC 558902 Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735 || || ||||| ||||| | | ||| ||||||||||| || || || || || | | | Sbjct 558903 TTGAGCTCGAGGAACTCGAAGACATCCGAATGCCATGGCTCCAGGTAAATAGCAAAGGCG 558962 Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795 || || || || ||||||||||| | || | ||| ||| ||| |||| |||||| Sbjct 558963 CCAGGACGCTTGCCGCCTCCCTGATCCACATACCGTGCAACGTTGTTAAAGACCCTCAGC 559022 Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855 || |||| | |||||| || | ||||| || || |||| | | || |||| ||| Sbjct 559023 ATGGGAACCAGACCATTGGAGGTGCCATTGGTGCCGCAAATCGAGGTGCCCTTTGCCCGA 559082 Query 69856 ATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTC 69915 || | | | || || || || |||||| ||| || || | || || | | | Sbjct 559083 ATGCAATGCACATTCAGTCCAATACCACCTGCCGATTTTGAAATCATGGCGCACTGCTCC 559142 Query 69916 AATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC 69975 | | | | || ||||| || || | ||||| | | || ||||| |||| Sbjct 559143 ACGGATTTGAAAATGCCCTCGATCGAGTCGGCCGTCATGGTCAAGAGGAAACACGAAGAC 559202 Query 69976 ATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTT 70035 | || | | | || | || ||| | || || || || ||||| || || Sbjct 559203 AACTGTGGGCGATTTGTGGCAGCGGCAAAAAGAGTTGGCGAGGCATGAGTAAAGAATCGC 559262 Query 70036 TCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTAT 70094 || || | |||||||| ||||| | ||| | || |||||| | | | || ||||| || Sbjct 559263 TCGGACAAAAGATTGTAGGTTTCCACAGCAGCATCGATATCCTCTCCG-TGGATTCCAAT 559321 Query 70095 CGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAG 70154 || || |||||||||||||| || || || || | | || || | || | || Sbjct 559322 TGCCACGCGCATCAACATATGTTGTGGGCGCTCAGCGATCTTTCCGTTCCTCTTAAGCAA 559381 Query 70155 GTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAAT 70214 |||||| ||| || || ||||| ||||||||||| ||| |||||| | || || || Sbjct 559382 ATATGATCGTTCGAGGGTCTTAAAACCAAAATAGTTATATCCAAAGTCGCGATCATAGAT 559441 Query 70215 AATAACAGAATTTAG 70229 ||| || ||||| Sbjct 559442 TATAGAGGAGTTTAG 559456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686859394084560