Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5351 140 1e-27 >seq5351 Length=991022 Score = 140 bits (154), Expect = 1e-27 Identities = 360/535 (67%), Gaps = 30/535 (6%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||| | || || ||||||||| || |||| ||| || || || Sbjct 258078 TTCTGGACCGTGGAGGAGGTGGACCTGTCCAAGGACCTGACCGACTGGCAC---CG-CT- 258024 Query 443397 TCTAG--CCATGAACGCGATTTC--TTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGA 443452 | || | | || ||| | || ||| | | | ||||||||||| ||| | ||| Sbjct 258023 TGAAGGACGACGAGCGCCACTTTATTTCGCACG--TGTTGGCCTTCTTCGCAGCCTCCGA 257966 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 || || ||| ||||||||||||| ||| ||| | | ||| | ||| ||||| Sbjct 257965 TGGCATTGTCAATGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGATCACAGAGGC 257906 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 ||||| |||||||| ||||| ||| ||||||||| | ||| | ||| | |||||| Sbjct 257905 CCGCTGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTACAGTGT 257846 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCTCATCGTT 443629 | ||||| | ||| || |||| ||| | ||||| || | | ||| | | Sbjct 257845 GCTGATCGACACA-TACATCCG--CGATCCGCACCAGCGAGAGTACCTGTTCAACGCCAT 257789 Query 443630 CATGACCACGCCAGGCATCACTGAA----AAGACTCGCTGGGCAAAACAGTGGCTCGAAC 443685 | || | ||| | | |||| ||| || |||||| | ||| || | Sbjct 257788 CGAAACGATGCCGG----CGGTGAAGCGCAAGGCTGACTGGGCCATGTCCTGGATCT--C 257735 Query 443686 GAGAAAATCT--CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTT 443743 || || || ||||| ||||| | |||| ||||| | || ||||| | || Sbjct 257734 CTCCAAGTCAGCCAACTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAAGGCATCTT 257675 Query 443744 GTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTC 443803 || ||||||||||| |||||||| |||||| |||| ||||| || || |||| || | Sbjct 257674 CTTCAGCGGCAGCTTC-GCCTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCGGGAC 257616 Query 443804 TGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 ||||||| ||||| |||||| ||||||||||| |||||||||| ||||| Sbjct 257615 TGACCTTCTCCAACGAGCTGATCTCAAGGGACGAGGGTCTGCATTGCGATTTCGC 257561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588218902906530