Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq4499 145 3e-30 >seq4499 Length=1650 Score = 145 bits (160), Expect = 3e-30 Identities = 288/421 (68%), Gaps = 14/421 (3%) Strand=Plus/Plus Query 2586 CGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACGGTTT 2645 || ||||| || ||||||| ||||| | || || |||||||| || | | | |||| Sbjct 110 CGGCGATTATTGAACCAGTCGACCCATTTAAGCGTTGCCAGTTCAACAGCGTCTCTGTTT 169 Query 2646 TTCCA--GCTCTTACGG-TGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCC 2702 ||||| | ||| | | | || | || | ||||||||| || || ||| |||| || Sbjct 170 TTCCATGGTCCTTGCCGATAGATGAGTTCAGTTTTGTAAAGTCCGTTAATGGTCTCCGCG 229 Query 2703 ATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTCTTTT 2762 | || || ||||| || || || ||| || || || | | || ||||| Sbjct 230 AGGGCATTATCATAGGAATCCCCAACACTGCCGACAGAGGCAACGAGGCCCGCTTCAGCC 289 Query 2763 AGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATGG-- 2820 |||| | ||| ||| | |||||||| ||| |||| ||||| || ||| | Sbjct 290 AGTCTTTGCGTGTAGCGAATGGACACATATTGACAGCCCCTATCGGAATGGTGGGTCACT 349 Query 2821 -TGCCAGACGGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTT 2879 |||| || | | |||| |||||||| || |||||||||||||| |||| | Sbjct 350 TTGCCCTCGGGCTGCCTCTGGCACAGAGCCTGCTCAAGGGCATCCAGCACGAA-GTCGGT 408 Query 2880 TCCATAGAC----GATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGAT 2935 || | | |||||||| ||||||||||| || | |||||| ||||||||||| Sbjct 409 ---ATGGGCCGTTGATGAGACACGCCACCCCACAATCACGCGGGCAAATACATCAATGAT 465 Query 2936 AAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAG 2995 || |||||||| || ||||||||||| ||| |||||||||||||| | ||||| || Sbjct 466 GAAGGCCACATACACAAAGCCCTGCCAGGTGGAAACGTAAGTAAAATCCGAAACCCAGAG 525 Query 2996 C 2996 | Sbjct 526 C 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203281743486820