Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq5380 190 5e-43 seq4595 159 8e-34 seq5614 149 1e-30 seq5446 131 4e-25 >seq5380 Length=870010 Score = 190 bits (210), Expect = 5e-43 Identities = 177/225 (79%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || | ||| | ||||||||| || || ||||||||||| | ||||| Sbjct 656803 ACGAAGTCGGAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAATCAGAGAGGGT 656744 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||||||||||| |||||||| || || || || || ||||||| ||| Sbjct 656743 GCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCC 656684 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| ||||| ||| || |||||||| || || || ||| ||||| || Sbjct 656683 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAG 656624 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| |||||||| ||||| || || | |||||| || Sbjct 656623 GGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTT 656579 >seq4595 Length=987418 Score = 159 bits (176), Expect = 8e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || || ||||| || |||||||| ||||| | | || | ||||||||| Sbjct 267602 GACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGACAAAGTGCGTCCATCTTC 267661 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||||||||||| |||||||| || || || || || ||||||| ||| ||||| || || Sbjct 267662 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTATCTTG 267721 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||||| || ||||||||||| || || ||||| |||||||| ||||| Sbjct 267722 AATCTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTCTT 267781 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || || ||||| || || | ||||||| Sbjct 267782 TCCGGTCAGGGTCTTCACGAAGATCTGCATT 267812 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || || || || || |||||||| || || | | || | ||||||||| Sbjct 268058 GACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCTTC 268117 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||||||||||| || ||||| || || || || || ||||||| ||| ||||||||||| Sbjct 268118 AAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTG 268177 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||| || ||||| || ||||||||||| || || ||||| |||||||| ||||| Sbjct 268178 GATTTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTCTT 268237 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || ||||| || || | |||||| Sbjct 268238 TCCGGTCAGGGTCTTCACGAAGATCTGCAT 268267 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| ||||| || ||||| || ||||| | || || | |||||||| ||||||||||| Sbjct 267842 AGTAGACTCCTTCTGGATATTGTAATCAGACAGAGTGCGCCCATCTTCAAGCTGCTTGCC 267901 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 |||||||| || || || || || ||||||| ||| |||||||||||||| || || Sbjct 267902 GGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGGATTTTGGCCTT 267961 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || || ||||| ||||| || || ||||| |||||||| |||||||| || || || Sbjct 267962 TACATTCTCGATAGTGTCCGATGGCTCCACCTCCAGAGTGATGGTCTTTCCAGTCAGGGT 268021 Query 211097 CTTTACAAACACCTGCAT 211114 ||| || || | |||||| Sbjct 268022 CTTCACGAAGATCTGCAT 268039 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || || ||||| || |||||||| || || | | || | || || || Sbjct 268514 GACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGACCGTCCTC 268573 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||||||||||| |||||||| || || || || || ||||||| ||| ||||||||||| Sbjct 268574 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTG 268633 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || || |||||| || ||||| || || ||| |||||||| || || || || || Sbjct 268634 AATTTTGGCTTTCACATTCTCGATCGTATCGGAGGGCTCAACCTCCAGGGTAATGGTTTT 268693 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || | ||||| ||||| | ||||||||| Sbjct 268694 TCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 268726 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| || || || || || |||||||| || || | | || | || || || Sbjct 268286 GACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAAAGTACGACCGTCCTC 268345 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||||||||||| ||||| || || || || || || ||||||| ||| ||||| || || Sbjct 268346 AAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCCTTATCTTG 268405 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||||| || ||||||||||| || || ||||| |||||||| ||||| Sbjct 268406 AATCTTGGCCTTCACATTCTCGATGGTGTCCGATGGCTCCACCTCCAGAGTGATGGTCTT 268465 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| ||||| || || | |||||| Sbjct 268466 TCCGGTGAGGGTCTTCACGAAGATCTGCAT 268495 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| ||||| || |||||||| ||||| | | || | || || Sbjct 267372 AGCACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAATCGGACAAAGTGCGACCGTCC 267431 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| |||||||| ||||| || | || || || || ||||| | ||| ||||||||| Sbjct 267432 TCCAGTTGCTTGCCGGCGAAAATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCC 267491 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || |||||||| || || ||||| || || ||||| |||||||| || Sbjct 267492 TGGATTTTGGCCTTCACGTTCTCAATAGTGTCCGACGGCTCTACCTCCAGAGTGATGGTT 267551 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || || | |||||| Sbjct 267552 TTTCCGGTAAGGGTCTTCACGAAGATCTGCAT 267583 >seq5614 Length=3457230 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| ||||| ||||||||||| || |||| || || | ||| || Sbjct 1200684 AGGACCAAATGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGACAGAGTGCGTCCGTCC 1200625 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || || ||||| || |||| || ||||||||| Sbjct 1200624 TCAAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 1200565 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||| || ||| ||| ||||| | ||||| ||| Sbjct 1200564 TGGATCTTGGCCTTGACGTTCTCAATGGTATCGGAGGGTTCGACCTCCAAGGTGATGGTC 1200505 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || | |||||| ||||| | |||||| || Sbjct 1200504 TTGCCGGTTAAAGTCTTGACAAAGATCTGCATATT 1200470 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| ||||| ||||||||||| || |||| || || | ||| || Sbjct 1200912 AGGACCAAATGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGACAGAGTGCGTCCGTCC 1200853 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || || ||||| || |||| || ||||||||| Sbjct 1200852 TCAAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 1200793 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||| || ||| || ||||| | ||||| ||| Sbjct 1200792 TGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGGCTCGACCTCCAAGGTGATGGTC 1200733 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| ||||| | |||||| Sbjct 1200732 TTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1200701 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| ||||| ||||||||||| || || | || || | ||| || Sbjct 1201140 AGGACCAAATGCAAAGTAGACTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 1201081 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || || ||||| || |||| || ||||||||| Sbjct 1201080 TCAAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 1201021 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||| || ||| || ||||| | ||||| ||| Sbjct 1201020 TGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGGCTCGACCTCCAAGGTGATGGTC 1200961 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| ||||| | |||||| Sbjct 1200960 TTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1200929 >seq5446 Length=1541693 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || | ||||| | |||||| Sbjct 1371107 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCC 1371166 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| |||||||| || || || || || || || | ||| ||||| ||| Sbjct 1371167 TCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCC 1371226 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || ||| ||||| | || || ||| Sbjct 1371227 TGAATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGTTCCACCTCCAAGGTAATGGTC 1371286 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || || || | ||||| Sbjct 1371287 TTGCCGGTAAGGGTTTTAACGAAGATTTGCAT 1371318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159066543692210