Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ficusphila_20[refseq_20GCF_5F000220665.1_202013-03-04] 5,754 sequences; 152,439,475 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5380 504 1e-137 >seq5380 Length=870010 Score = 504 bits (558), Expect = 1e-137 Identities = 1255/1884 (67%), Gaps = 26/1884 (1%) Strand=Plus/Plus Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829 ||||| |||| || |||||||| | | ||| || ||||| || ||||||||||| Sbjct 557583 TTCTTGTCCACGGTGAACTGAATGGCGTTTGCTGCCGGCTTTGTGCGCAGATAGTACATT 557642 Query 76830 CCAGTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 || ||||| || ||||| | ||| ||| || || ||| || || || || | Sbjct 557643 CCGGTTTTAAG-CCCAGCTTTCCAGGAGTAAAAGTGTATGGACGTAAGCTTTCCGTAGTT 557701 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 || || || | |||||| || | ||||| ||||||||||||||||| |||| |||||| Sbjct 557702 TGGCTCTGCCACATGAATGTTGAAGGACTGGCTTTGATCGATGAAAGCACCTCGATCAGC 557761 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 |||||||| ||| | | ||| || |||||||| | |||||| ||| | | || Sbjct 557762 GGCCATTTTAATAGTAGACTTCACAGAGATTTCCCACACGGTTTTGTAAAGATCTCGGAC 557821 Query 77009 ATCAT-CTGGAAGGTTTGTAT--TTTGAATGGAACCACCATCTG-ATATAATTGTATTCT 77064 | | | ||| || || || |||||||||| || || ||| | || ||| |||| Sbjct 557822 CTTCTGCGGGATGGCTTCGATGTTTTGAATGGAGCC-CCTGCTGGAAATTATTTGGTTCT 557880 Query 77065 TTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTA 77124 | |||||||| | |||||| | | || || | | || | | ||| | || || | Sbjct 557881 TCATATCATCGTCCCACAAGTCCAATTCAGTCAGGTCCCTCAACAAGTGATGGTTGACCA 557940 Query 77125 TTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAG 77184 ||||||||| || |||| |||| | ||||||||||||| | ||||| || || | || Sbjct 557941 CTTGAAATTCGCCGGACAGAACTCGTCTAGTGTAAATATTAGTCGTATACGGCTCGAAAG 558000 Query 77185 ATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAAC 77244 |||| ||||| |||| ||| || |||||||| ||||| |||||||| ||||| | | Sbjct 558001 ATTCGTTGTTGCCCATAATCTGGGCAGTAGATGCAGTGGGCATAGGAGCCACAAGCAGGG 558060 Query 77245 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 || |||| ||| || | |||| || || || | | ||| ||||| || | | Sbjct 558061 AGTTCCTGACACCGTGCTTCTTGATCGACTCCTTCAGTTTCTGCCAGTCCCACAGGTTCG 558120 Query 77305 AAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATT-A 77363 || ||||| | ||||| || ||||| || ||||| | | ||| || | Sbjct 558121 TTGGCGTTTTGTCCCACATGTCGTACTGCAGAATACCCTTACTTAC-GGGGCTCCCTTCA 558179 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 || ||||| || || || || | ||||| || |||||||| || ||||| || ||||| Sbjct 558180 TAGGTTTCGTATGGACCATCAATCTCAGCCAGCTCACAACTGGCCTCCAAAGCGCCGTAG 558239 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 ||||| ||||| || |||| || ||| | | ||||| ||| ||| | || | Sbjct 558240 TAAATAGTTTCAAATATCTGCTGATTCAAAAGACCAGCTTCTTCACTTTCATAGGGGAAT 558299 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | | ||||| ||||| || || || ||||||||||| || || | || | ||||||| Sbjct 558300 CGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACTCCGATGCCCACGGGGCGATGTCTC 558359 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 |||||| | || || || || | |||||||| || || || || || || || ||| Sbjct 558360 AAATTGGATTTCTTTGCCTCCGGCAGGGGATAATAGTTTATATCGATTATCTTGTTAAGA 558419 Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCTTC-CATCT 77660 ||| | || || || || |||||||| ||||| | ||||| | | Sbjct 558420 TTTTTGGTGACCGTCTTGGTAACTTCTTTTAGTTTCTTGAAATCGTACGTCTTCTCGGGT 558479 Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTT 77719 | || |||||||| | || || ||||| | || || ||||| | ||||| | ||| Sbjct 558480 GTGACGAACATGTTAAGGGCGATGGATGCCAAGTTGCATACTGCAATCTCATCTGGCG-C 558538 Query 77720 GGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTG 77779 | || | || || || || || || || || || ||||||||||| | ||| || || Sbjct 558539 AGAGTACTCTACGATTTCTGTGCAAAGGTTGCTGCACTTGATAGTGCCAACATTCTGCTG 558598 Query 77780 GTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTG 77839 ||||||||| ||||| | || ||| | || ||| | ||| | || ||||| | ||| Sbjct 558599 GTTGCTCTTCCGGTTGCAGGCATCTTTAAAGAGCATATAAGGATTTCCCGTTTCCACCTG 558658 Query 77840 TGATTCGATAATAGATTTCCA-GACGACTCTAGCTTTTA-TCATAGATTTGTATCGCCTC 77897 | || ||||| | ||| | |||| ||| || | | | | || | | || | | Sbjct 558659 CGCCTCAATAATCGCGAACCACAAGGACT-GAGCCTTAACTACTCGGTTGGCA-CGACCC 558716 Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 ||| || || | || ||| ||||||||| || ||||||||||| | | || Sbjct 558717 TCTTGCTCGTACTTCAAGTACAGCTTTTCAAATTCGTCGCCCCAAACATCGTGAAGGCCG 558776 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 ||||||| || || ||||| | ||||| || | | ||| || |||||||| ||| Sbjct 558777 GGGCATTTATGAGGACACATGAGGGACCAATCCTCGTTGGCCTCTACACGTTTCATGAAG 558836 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077 ||||| |||||||| | || |||| || || | | || ||||| ||||| || Sbjct 558837 AGATCGGGTATCCACAAGGCGTAGAATAAGTCGCGTGCACGATTCTCTTCCTTTCCGGTG 558896 Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137 || || || || ||||| ||||| | | ||| ||||||||||| || || || || || Sbjct 558897 TTTTTCTTGAGCTCGAGGAACTCGAAGACATCCGAATGCCATGGCTCCAGGTAAATAGCA 558956 Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197 | | ||||| || || ||||||||||| | ||| | || ||| ||| | || Sbjct 558957 AAGGCGCCAGGACGCTTGCCGCCTCCCTGATCCACATACCGTGCAACGTTGTTAAAGACC 559016 Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257 |||| ||| |||| | ||| || || || ||||| || || |||| | | || || Sbjct 559017 CTCAGCATGGGAACCAGACCATTGGAGGTGCCATTGGTGCCGCAAATCGAGGTGCCCTTT 559076 Query 78258 GCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 || ||||| |||| | || || || || |||||| || || || | || Sbjct 559077 GCCCGAAT----GCAATGCACATTCAGTCCAATACCACCTGCCGATTTTGAAATCATGGC 559132 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 ||| | | || | | | | || ||||| || ||| || ||||| | | || || Sbjct 559133 GCACTGCTCCACGGATTTGAAAATGCCCTCGATCGAGTCGGCCGTCATGGTCAAGAGGAA 559192 Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433 ||| ||||| || | || || | || ||| | || || || ||||| || Sbjct 559193 ACACGAAGACAACTGTGGGCGATTTGTGGCAGCGGCAAAAAGAGTTGGCGAGGCATGAGT 559252 Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 ||| || || || | |||||||| ||||| | ||| | || || ||| | || Sbjct 559253 AAAGAATCGCTCGGACAAAAGATTGTAGGTTTCCACAGCAGCATCGATATCCTCTCCGTG 559312 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||||| | || || |||||||||||||| || || | ||| | |||| || | Sbjct 559313 GATTCCAATTGCCACGCGCATCAACATATGTTGTGGGCGCTCAGCGATCTTTCCGTTCCT 559372 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613 || | ||| |||||| ||| | || ||||||||||||||||| ||| |||||| | Sbjct 559373 CTTAAGCAAATATGATCGTTCGAGGGTCTTAAAACCAAAATAGTTATATCCAAAGTCGCG 559432 Query 78614 CTCGTAAATAATAACAGAATTTAG 78637 || || || ||| || ||||| Sbjct 559433 ATCATAGATTATAGAGGAGTTTAG 559456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694618835946560