Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= AC_000013.1 Length=45063 Score E Sequences producing significant alignments: (Bits) Value seq17438 87.8 5e-13 >seq17438 Length=17193109 Score = 87.8 bits (96), Expect = 5e-13 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1060 GCCCCTCGTTCGGGCTTGGCCGTAAAGTTTTTTATCGATGTGGGAGCCGGTGTTATCGAT 1119 || || ||||||||| ||||||| ||| || |||||||| || ||||| ||| | || Sbjct 7488723 GCGCCACGTTCGGGCCTGGCCGTGAAGAACTTCATCGATGTAGGCGCCGGGGTTGTAGAC 7488664 Query 1120 AGCGATTACCGGGGCATCGTTAGCGTCCTCCTTTTCAATTTTTCGGACCACAATTTCAAC 1179 |||||||| |||| | | | || |||| ||||| ||||||| | | || | Sbjct 7488663 GAGGATTACCGCGGCAACCTGGGTGTTGTCCTGTTCAACCATTCGGACGCCGACTTTGAG 7488604 Query 1180 GTCCGTCGGGGCGATCGCATAGCTCAGTTAATTTTGGAGCG 1220 || || |||||||||||||| ||||| |||| ||||| Sbjct 7488603 GTAAAGCGTGGCGATCGCATAGCACAGTTCATTTGCGAGCG 7488563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144050161032000