Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq17440 95.1 1e-14 >seq17440 Length=24565398 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/156 (75%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 25921 TTTGCCTCGAGGTTTGCACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTG 25980 |||| | | ||| ||||||||||| || ||||| |||| |||||||| | ||||| || Sbjct 18410374 TTTGGCGCAAGGCTTGCACGGCTTCCATGTGCATGAATTTGGCGACAATACAAACGGATG 18410315 Query 25981 CACGTCGGCCGGTGAGCACTTTAATCC-CACCAATGAGGACCACGGCGCTCC---CGATG 26036 || |||| | || |||||||||||| ||||| |||| || ||||| || ||||| Sbjct 18410314 CATGTCGTCGGGGCCGCACTTTAATCCTCACCAGA-AGGAGCATGGCGCACCAACCGATG 18410256 Query 26037 CTGAAATTAGGCATGTTGGCGACTTGGGCAACATAA 26072 | || | ||| | ||||| ||||||||||||| Sbjct 18410255 GCG---TTCGTCATCTAGGCGATTTGGGCAACATAA 18410223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428244957183200