Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17438 147 3e-30 >seq17438 Length=17193109 Score = 147 bits (162), Expect = 3e-30 Identities = 334/499 (67%), Gaps = 14/499 (3%) Strand=Plus/Plus Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 ||| || || || | || ||| ||| | ||| | |||| ||||||| || || || Sbjct 3984209 GAAATCCTCAATTTTTTCAACCTGCCGCTTGATGCGGAGCTTGGGAAATGGACGTGGCAC 3984268 Query 145665 CCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 145724 | ||| ||| || || || ||||| || || || |||||||||| || |||| Sbjct 3984269 ACGTTTCATCTGCTCCTGCAACGGTTCCACATGATTCAGATAGACGTGCGTATCGCCCAT 3984328 Query 145725 GACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAG 145784 ||| | ||||| || |||| || ||||| | || || | ||| ||||| ||||| Sbjct 3984329 CGTGTGTACAAAGTCGCCAGGCTTCAGACCCGTCACATGTGCAATCATATAGGTGAGCAG 3984388 Query 145785 GGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844 || |||| || ||||||||||| || || || |||||||| | |||||| |||| Sbjct 3984389 GGCGTAGGATGCGATGTTGAAGGGAACACCTAGACCCATGTCGGCACTGCGCTGATACAT 3984448 Query 145845 CTGGCAGGAGAGCTCCCCGC------CCGCCACGTAGAACTGGCACAGGAGGTGGCAGGG 145898 ||||||||||||||| || | || ||| |||| || |||| |||||| || Sbjct 3984449 CTGGCAGGAGAGCTCGCCCCTTGACTGCGACACAAAGAATTGCACCAGGCAGTGGCACGG 3984508 Query 145899 CGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCT 145958 ||||| ||||| || | ||| ||| ||||| |||| | | || | | Sbjct 3984509 TGGCAGCGCCATCTTAGGTATATCCAACGGATTCCATGCGGACATTATGATGCGACGATC 3984568 Query 145959 CTCGGG---GTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCC 146015 | |||| ||| | || | | | |||| | | | |||||| |||||||| || Sbjct 3984569 CGCGGGATTGTTGCGTATGGTGT---CAATCACCTGCTGCAACTGGTCGACGCCCTGGCC 3984625 Query 146016 CCGGTAATCTGTCTTGGAGTCCACG-TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGT 146074 || || ||| | | || || ||| ||||||| ||||| | ||||||||| |||| Sbjct 3984626 TGTATAGTC-GTCATCGCAGCCGCGATACTCGGCCCCAAAGTGACGCCACTGGAAACCGT 3984684 Query 146075 AGACGGGCCCCAGGTCCCC 146093 | ||||| ||||| || || Sbjct 3984685 ACACGGGACCCAGATCTCC 3984703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589948163257600