Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq17440 87.8 3e-12
>seq17440
Length=24565398
Score = 87.8 bits (96), Expect = 3e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | || ||| | || || || || || ||| | ||| ||||| |
Sbjct 435308 AATGCAGATCTTCGTTAAAACATTGACTGGGAAGACCATCACTCTGGAGGTTGAACCTTC 435249
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| |||||| || | || || || ||||| || || || || || || || ||
Sbjct 435248 CGACACAATTGAGAACGTTAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCA 435189
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| | || || || || |||||||| || || ||| |||| || || || |||||
Sbjct 435188 GCAGCGTCTCATCTTCGCCGGAAAACAGTTGGAAGATGGTCGCACCTTGTCCGACTATAA 435129
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||| ||||| || ||| | || |||||| | ||| | ||||| || ||
Sbjct 435128 TATTCAGAAAGAGTCGACTCTCCACTTGGTTCTCCGTCTCCGAGGAGGAAT 435078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755291310592000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |