Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30] 17,440 sequences; 200,467,819 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq17438 100 2e-16 >seq17438 Length=17193109 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || || |||||||| || || || ||||| || |||||||| ||||| || ||| Sbjct 3984457 TCCTGCCAGATGTATCAGCGCAGTGCCGACATGGGTCTAGGTGTTCCCTTCAACATCGCA 3984398 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTA 20577 || || ||||| || ||||||||||||||||| || | | | || | || ||||| Sbjct 3984397 TCCTACGCCCTGCTCACCTATATGATTGCACATGTGACGGGTCTGAAGCCTGGCGACTTT 3984338 Query 20578 GTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTT 20627 || ||||| || || || |||| | || || |||||| | ||||| || Sbjct 3984337 GTACACACGATGGGCGATACGCACGTCTATCTGAATCATGTGGAACCGTT 3984288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399099153440800