Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 159 3e-34
>seq17438
Length=17193109
Score = 159 bits (176), Expect = 3e-34
Identities = 277/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGA 21005
|| ||||| | || |||| ||||| |||||||| || || |||| ||||| || ||
Sbjct 3984309 TAGACGTGCGTATCGCCCATCGTGTGTACAAAGTCGCCAGGCTTCAGACCCGTCACATGT 3984368
Query 21006 GCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATG 21065
|| |||| ||| || || ||||||||| |||||||| || || || || || ||||||
Sbjct 3984369 GCAATCATATAGGTGAGCAGGGCGTAGGATGCGATGTTGAAGGGAACACCTAGACCCATG 3984428
Query 21066 TCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCC--GA--GCCACGTAAA-ACT 21120
||||| | ||| |||| ||||||||| ||||| |||| || || || ||| | |
Sbjct 3984429 TCGGCACTGCGCTGATACATCTGGCAGGAGAGCTCGCCCCTTGACTGCGACACAAAGAAT 3984488
Query 21121 GACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179
||| | | ||| || || || || |||||| | | ||| || ||||| |||
Sbjct 3984489 TGCACCAGGCAGTGGCACGGTGGCAGCGCCATCTTAGGTATATCCAACGGATTCCATGCG 3984548
Query 21180 CACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGC 21239
|||| | |||||| ||||| ||| || || || | ||| | ||| |
Sbjct 3984549 GACATTATGATGCGACGATCCGCGGGATTGTTGCGTATGGTGTCAATCACCTGCTGCAAC 3984608
Query 21240 TGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGT 21299
||||| || ||||| || |||| | | ||| || | ||||| |||||||| ||
Sbjct 3984609 TGGTCGACGCCCTGGCCTGTATAGTCGTCATCGCAGCCGCGATACTCGGCCCCAAAGTGA 3984668
Query 21300 CTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTC 21337
| ||||||||| |||||||| || |||||||| |||||
Sbjct 3984669 CGCCACTGGAAACCGTACACGGGACCCAGATCTCCCTC 3984706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427685076211200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |