Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq17434 502 4e-137
seq17439 293 3e-74
>seq17434
Length=8399593
Score = 502 bits (556), Expect = 4e-137
Identities = 1239/1864 (66%), Gaps = 34/1864 (2%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| || |||| | | || || ||||| || ||||| ||||||||||| || |||
Sbjct 1622251 GTGAACTGTATGGCATTTGCAGCCGGCTTCGTGCGAAGATAATACATTCCCGTCTTAAGA 1622310
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
||| |||| ||| ||||| || || |||||| ||| | || || || | |
Sbjct 1622311 CCGGCTTTCCACGAGTAAAAATGGATCGATGTCAGTTTGCCATAGTTGGGCTCAGCCACA 1622370
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| || || | || ||||||||||| ||||| || || | || || |||||||| ||
Sbjct 1622371 TGTATGTTGAACGACTGACTTTGATCAATGAATGCCCCGCGATCGGCTGCCATTTTGATC 1622430
Query 78898 ATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956
| || ||| ||| |||||||| | || ||||| | | | | || || ||| |
Sbjct 1622431 GTTGT-TTTCACGGATATTTCCCACACGGTCTTATACAGATCCCTCACATTTTTTGGTAT 1622489
Query 78957 G--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013
| || | | || || || ||||| | | || || || |||||| || || ||||
Sbjct 1622490 GGATTCGATGTTTTGTATTGATCCTCGACTGGCGATTATTTGATTCTTCATATCATCATC 1622549
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| || | ||| |||||| | | | | ||| |||| || || || || || ||
Sbjct 1622550 CCACAAGTCCAGCTCCGTTAAATCACGCAACAAATGATGATTCACCACCTGGAACTCACC 1622609
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
|||| || | || ||||| || || |||||| || || | |||||||||||| ||
Sbjct 1622610 GGACAGCACGCGTCGGGTGTAGATGTTTGAGGTATACGGCTCAAACGATTCATTATTGCC 1622669
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
|| |||||||| || ||||| |||||||| || || || | | | ||| | | |||
Sbjct 1622670 CATTATTTGAGCCGTAGATGCGGTTGGCATGGGCGCAACAAGCAGAGAATTGCGCACACC 1622729
Query 79194 GTATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-GACAAC 79250
||| || |||| || || || | ||| ||||| ||||| | || | |
Sbjct 1622730 --ATGCTCCTTGATCGACAGCTTAAGCGAGTTCCAGTCCCAGAGATCGGTTGGTGTC--- 1622784
Query 79251 ATT---CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTC 79307
|| ||| | ||| || |||| ||||| || ||| | ||||| || |||||
Sbjct 1622785 -TTGCCCCACATATCGTACTGTAAGATACCCTTGCTAACTGGACTTCCTGGATAGGTTTC 1622843
Query 79308 ATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGT 79367
||| ||||||||||||| ||| ||||| || || || || | ||| || |||| |||||
Sbjct 1622844 ATAGGGTCCTTCCTTTTGGGCCAATTCGCAGCTGGCTTCCAGTGCGCCAAAATAGATGGT 1622903
Query 79368 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG 79427
||| || || | | ||| | | | || ||| ||| ||| | |||| | | ||
Sbjct 1622904 TTCAAAGATTTGTTGATTTAAAAGTGCGGCCTCTTCGCTCTCATAAGGATGACGCATTAG 1622963
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
||| || || || || |||||||| ||||||||||| || |||| ||| | ||| ||
Sbjct 1622964 AATCAATGCATCCGCGAATCCTTGCACACCAATACCAATGGGTCGATGGCGAAAATTGGA 1623023
Query 79488 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGAC 79547
| | || || |||| ||||| || || || || || |||||||| | |||| ||
Sbjct 1623024 TTTCTTTGCCTCCGGAAGCGGATAGTAGTTGATGTCAATTATTTTATTCAAATTCTTGGT 1623083
Query 79548 TATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA----TCGTCCATCTATTACAA 79603
|| | |||| || || || ||||| || || | | ||| | | ||||
Sbjct 1623084 TACTGTTTTGGTGACTTCTTTCAGTTTCTTGAAGTCGTACGTTTTGTCGGACG-TCACAA 1623142
Query 79604 ACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 79663
|||||||||| || | ||||| | ||| || ||||| | |||| | ||| ||| |
Sbjct 1623143 ACATGTTCAATGCAATCGATGCTAAATTGCACACGGCAATTTCATCGGGTGCCGAATACT 1623202
Query 79664 GTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCT 79723
| ||||||||||| || ||||| || || ||||| || | |||||| ||||| ||||
Sbjct 1623203 CGACAATTTCAGTGCATAGATTACTGCATTTGATGGTGCCCACATTTTGCTGATTGCTCT 1623262
Query 79724 TTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTA 79783
| ||| || | ||||| | || ||| | || || ||||| || | ||| | ||| |
Sbjct 1623263 TGCGGTTGCATGAGTCCTTGAACAGCATGTAAGGTGTGCCAGTCTCCACCTGTGCTTCAA 1623322
Query 79784 TAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC--TCTTTC 79841
| || || ||| | | |||| || |||| || | || |||| | ||||||
Sbjct 1623323 TGATGGCAAACCAAAGTGTTTGAGCTTTAATTA----CTCGATTCGCTTTGCCCTCTTTC 1623378
Query 79842 --GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACAT 79899
|||||| || | | || || ||||| ||||||||||| | | || |||||
Sbjct 1623379 TCGTATTGAACGTACAGTTTCTCAAAATCGTCGCCCCAAACATCTTGGAGGCCGGGACAC 1623438
Query 79900 TCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCA 79959
| | || ||||||| ||||| || ||| | | || ||||||||||| ||||||
Sbjct 1623439 TTATGTGGGCACATCAGGGACCAATCCTCATTGGCTTCGACGCGTTTCATAAACAGATCA 1623498
Query 79960 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT 80019
|| ||||| | || ||| || || | | | ||||||||| || || || || ||
Sbjct 1623499 GGTATCCATAAGGCATAAAACAGCTCACGTGCCCGATGCTCCTCTTTGCCCGTGTTTTTC 1623558
Query 80020 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 80079
|| | ||| | || | | ||||| ||||||||||| ||||| || ||||| | |
Sbjct 1623559 TTCAAATCCATAAATTCTAATATATCCGAATGCCACGGCTCCAAATAGATGGCAAATGCA 1623618
Query 80080 CCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 80139
|||||||| || || |||||||| | || | || ||||| | || | || |
Sbjct 1623619 CCCGGTCGCTTACCGCCACCCTGATCCACATAGCGTGCCACATTATTGAATACACGCAGC 1623678
Query 80140 ATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 80199
||||| | | ||||| || || ||||| || || | || || | || ||||||||
Sbjct 1623679 ATTGGCACCAGCCCATTCGAAGTGCCATTCGTGCCACAAATCGAGGTGCCTTTGGCACGA 1623738
Query 80200 ATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 80259
||| | || || || || || || || ||| ||||| | |||||| |||
Sbjct 1623739 ATACAATGAACGTTCAGCCCGATGCCACCAGCGGCTTTGGAGATCATGGCGCATTGTTCG 1623798
Query 80260 AACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC 80319
| | | | |||||||| || ||| | |||| | | || ||||| |||
Sbjct 1623799 ACGGATTTGAAAATGCCCTCAATCGAATCGGAGACCATGGTTAAAAGGAAACACGACGAC 1623858
Query 80320 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 80379
||||| ||||| | || | || ||| | || || || || ||||| || | ||
Sbjct 1623859 ATTTGCGGACGATTTGTGGCAGCGGCAAAAAGTGTTGGCGATGCATGCGTGAAGTACCTT 1623918
Query 80380 TCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTA 80437
|||||||| ||||| || ||||| | ||| | || |||| ||| | ||| || || |
Sbjct 1623919 TCAGACAGCAGATTATAGGTCTCCACAGCAGCATCAATAT--CATCGCCATGTATCCCAA 1623976
Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497
|| ||| ||||| | ||||||||| || | || | || |||| |||||| |||| ||
Sbjct 1623977 TCGAGACGCGCATCAGCATGTGCTGTGGACGCTCTGCTATTTTGTGATTTATCTTCAGCA 1624036
Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 80557
| || ||| || | || ||||| |||||||| || || |||||| || ||||| |
Sbjct 1624037 AATACGATCGCTCGAGCGTCTTAAATCCAAAATAATTATAGCCAAAGTCACGATCGTAGA 1624096
Query 80558 TAAT 80561
| ||
Sbjct 1624097 TGAT 1624100
>seq17439
Length=18325388
Score = 293 bits (324), Expect = 3e-74
Identities = 566/828 (68%), Gaps = 13/828 (2%)
Strand=Plus/Plus
Query 49672 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 49731
|| ||||| ||||| || || |||||||| ||||| || |||||||| || |||||
Sbjct 9056302 TGATATTCGCCCACTTTCTTCTCAAAAAAATTGGTTTTACCGTCCAATGAAATCATTTCC 9056361
Query 49732 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 49791
|||||| ||| ||||| | ||||| ||||| | || | || | |||
Sbjct 9056362 ATGAAAGTAAATGGATTCTTTGTGTTATATATTTTACCGACACCGAGCTCCACCAACAAG 9056421
Query 49792 CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 49851
| ||| || || || || |||||| ||||| |||||||||| || || || ||
Sbjct 9056422 CGATCGGCCACGAACTCAATATATTCGGACATCAGCGCACAATTCATGCCAATCAGATTT 9056481
Query 49852 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 49911
|| || | ||| |||| ||||| || || ||||| | || ||||| | | |||
Sbjct 9056482 ACAGGCAAAGCGTCAGTGAGAAACTCCTGCTCAATAGTCACAGCATCCGAGAC----GAT 9056537
Query 49912 CTAACGGTTTC-TTCAC---TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967
|| | | | | ||||| | || | |||| | || | ||||||| | || ||
Sbjct 9056538 CTCAATGATGCGTTCACGGCTGGGACGCTGCACCAGGTGCTGGAACATCATAACCGCAAA 9056597
Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027
||||| ||||| ||||| || | || || ||||| || || || || ||||||||
Sbjct 9056598 GTCGCAATGCAGCCCCTCATCACGGGAGATGAGCTCGTTTGAGAAAGTCAGACCGGGCAT 9056657
Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087
||||||||||||||||||||| || ||||| ||||| || ||||||||| |||||
Sbjct 9056658 TAGGCCACGCTTTTTAAGCCAGAAGATGGAGGCAAAACTGCCGCTAAAGAAGATGCCTTC 9056717
Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-TCCACTT 50144
|| || || ||||||| || | ||| ||| | |||| || ||| | ||||
Sbjct 9056718 GACGGCAGCGAAGGCAATAATGCGCTCCCCAAAGTTGGCAGCCTTGGATGAAATCCAAGA 9056777
Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204
| ||||| || ||||| |||||| ||||| ||||| || ||||| ||||||||
Sbjct 9056778 GAGCGCCCAGTCCGCCTTACGCTTTACAGCCGGCATTGTTTCAATAGCATTGAAGAGATA 9056837
Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264
| | || | |||| | |||||| ||||| | | ||| ||||| || || ||
Sbjct 9056838 ATCGCGCTGATGAGGATCTCGGATATAAGTGTCGATTAGCACACTGTACATCTCTGAGTG 9056897
Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324
| || || ||||| |||||||| || ||||| || | ||||| ||||||||||||||
Sbjct 9056898 TACATTCTCCATGGCAATCTGAAAACCATAGAAGCAGCGCGCCTCTGTAATCTGCACTTC 9056957
Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384
| ||| || ||| | | ||| || || || || || || ||| || || || ||
Sbjct 9056958 CTGGCTAAAGCGCTCAACCAGATTCTCGTTAACAATGCCATCGGAGGCGGCGAAGAAAGC 9057017
Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT-AGTTTATTCCAATCATTGATAT 50443
||| |||||| || ||||| || ||| |||| || || ||| || | || |
Sbjct 9057018 CAACACATGTGAAATGAAATGACGCTCATTGTCTGTTAAGCGTA-CCCAGTCCGTCATGT 9057076
Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491
| || |||| ||| || || ||||| ||||| |||||||| || ||||
Sbjct 9057077 CCTTGGATAGATCCACCTCCTCCACAGTCCAGAATGATGCTTCGGCCT 9057124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718112217401600
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