Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20grimshawi_20[refseq_20GCF_5F000005155.2_202006-06-30]
17,440 sequences; 200,467,819 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq17438 114 1e-20
>seq17438
Length=17193109
Score = 114 bits (126), Expect = 1e-20
Identities = 179/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299
|| || ||||| || |||| |||||||| |||||||| |||| || |||| |
Sbjct 7488485 CCAGTTGAACCAAAGCCAGCCTCGCCGCGTTCGGTGTCCTCCAGTTTGTCGACCTGCTCC 7488544
Query 5300 ACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACC 5359
| | || | | ||||| ||||| || | ||| ||||| | || || ||| |||
Sbjct 7488545 AGATCCGGATAGAAGATGCGCTCGCAAATGAACTGTGCTATGCGATCGCCACGCTTTACC 7488604
Query 5360 TCAAAGTCGCTGTTTCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTT 5417
||||||||| | |||||| ||| ||||| || || || | ||||| ||||| || |
Sbjct 7488605 TCAAAGTCG--GCGTCCGAATGGTTGAACAGGACAACACCCAGGTTGCCGCGGTAATCCT 7488662
Query 5418 CGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTG 5477
|||| | ||| || ||||| || ||||| |||| || || || ||||| |||||||| |
Sbjct 7488663 CGTCTACAACCCCGGCGCCTACATCGATGAAGTTCTTCACGGCCAGGCCCGAACGTGGCG 7488722
Query 5478 CTATGCGTCCGTAG 5491
| | || || |||
Sbjct 7488723 CCACTCGGCCATAG 7488736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447652790412800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |